Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01078 ATGGCGATCATCTGCTGTTATACCGGGCTACTCTTACGACGATGTATGGATGCTCACCCACTTATCAAAACCTACCCCGACATAGGCGAGCTTGCTTTTGGCTACAAAGGAAGAGTAATGGTAGCCGTTTTCATGTATCTTGAGTTGTATCTTGTTGCCATCGAGTTCTTGATATTGGAAGGAGATAACTTAGAGAAGTTGTTTCCAAACATGGGTTTGGAAGTTGCAGGGCTGAGAATTGGAGGGAAGCAAAGTTTTACTCTACTTGCTGCCCTTATAATCTTACCTACGACATGGTTAAGGAGTTTGAGTCTGCTTGCTTATGTTTCTGCTGGTGGGGTTTTGGCTTCTGTTATTATCGTCGGTTCTGTTTTCTGGGCTGGTGCAGTGGATGGTGTTGGATTTCATGAAAGAGGAAGTCTTTTGAATTGGGGTGGAATGCCAACTGCTATCAGCTTGTATGCCTTTTGTTATTGTGGCCATGCAGTGTTCCCCACTTTATGCAATTCCATGAAAGACAGAAGCCAGTTCTCTAAGGTGTTGCTTGTCTGCTTTATTCTTTGCACCTTTAACTATGGATCAATGGCAGTTTTAGGCTACCTGATGTATGGAGAAGGTTTGAAATCTCAAATAACACTAAATCTTCCTGTCGGAAAGGTCAGCTCGAAGATAGCAATCTACACCACATTAATCAATCCCTTCACCAAGTATGCACTTGTAGTTAATCCAATTGCGAATGCAATAGAAGAGTGGTTTCCGTTTCGTGACAGCAGGCTCATTAGCCTACTTATTAGAACTGTACTAGTGATCAGCACTGTCATCGTGGCGTTGACCATTCCACTTTTCGGGTACCTAATGGCATTCATCGGTGCATTTCTGAGTGTCACTGTTTCAATGTTGATGCCATGTATATGCTACCTCAAAATTTACAAGACTTCTCGAAGTTTTGGTTTAGACTTGGTGATTATCATCAGCATTTTGGCGTTGGGGTCTTTGGTTGCAGTCTTGGGAACTTACGATTCTCTAAGACAGATCATAAACCATCTGTAA 1050 0.4238 MAIICCYTGLLLRRCMDAHPLIKTYPDIGELAFGYKGRVMVAVFMYLELYLVAIEFLILEGDNLEKLFPNMGLEVAGLRIGGKQSFTLLAALIILPTTWLRSLSLLAYVSAGGVLASVIIVGSVFWAGAVDGVGFHERGSLLNWGGMPTAISLYAFCYCGHAVFPTLCNSMKDRSQFSKVLLVCFILCTFNYGSMAVLGYLMYGEGLKSQITLNLPVGKVSSKIAIYTTLINPFTKYALVVNPIANAIEEWFPFRDSRLISLLIRTVLVISTVIVALTIPLFGYLMAFIGAFLSVTVSMLMPCICYLKIYKTSRSFGLDLVIIISILALGSLVAVLGTYDSLRQIINHL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01078 349 Pfam Transmembrane amino acid transporter protein 1 339 IPR013057 -
Eupl04g01078 349 PANTHER OS05G0424000 PROTEIN-RELATED 2 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01078 Eupl-Chr4 16544560 16545921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01078 2 346 Amino Acid or Auxin Permease AAAP Family AT3G28960 56.196 2.32e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01078 K15015 - nnu:104598123 573.548