Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01076 ATGGAGAGAGACTCAAAGCCCAACAACTCAACTGAGGACCATGACATTGTCTCAGTACTGGAAAACCCAGGACCCAAAATTCCAAAACTCAGTTACCTTTGGAGATTATATGAAGAACATTACCCGCCTGGCTTTCTCAGAAAGGTGGTAGCAGAGATAATAGCTACGTTTCTATTGGTTTTTGTGGCTTGTGGGTCGGCTGCATTGAGTACAAGTGATGAACACAAGGTTTCGAAGCTGGGAGCTTCGATCGCAGGTGGGCTTATCGTAACTGTGATGATCCACGCTGTGGGTCATGTTTCGGGTGCGCACATGAACCCGGCGGTCACGTTAGCTTTTGCGGCCATCAGGCATTTTCCTTGGAGACAGGTTCCATTTTATGCTGCAGCTCAACTAACAGGAGCCATTGTTGCATCGTTTACGCTTCGTGAGCTACTGCACCCAATAAAGAATTTAGGAACTACATCTCCTTCTGGAACAGAAGTTCAGGCCTTGGTCATGGAGATAGTTGTAACGTTTTCAATGATGTTCATCACGTCCGCAGTCGCCACCGATACTAAAGCGATAGGAGAGTTAGCAGGGATAGCAGTTGGCTCCGCAGTTTGCATCACTTCCATCTTAGCCGGGCCGATATCAGGTGGATCGATGAACCCGGCAAGGACTATTGGTCCGGCAGTTGCAAGCCAACATTATAAGGGAATTTGGGTGTATGTGGTTGGACCAGTGTTGGGAACACTGATGGGTGCTTGGTCATACAACCTAATAAGGGTGTCAGATAAGCTGGTCCCTGGGCTGCTTGGTAACAAAGTTGAAGCTGCACCAAGTCGAATCATCCCGCAGCAATATTACACTGGGTTTGGGACAAAACGCATCCTCCACGTTGACGGGCGTTACCGAGGCTCACAGGTTCGTTGTATCCGAGCCTGTGAAGCTGTGATTGACTATAAATACAAGCCTCAATTCAGGCTTTTCAAAGAAGAGAGTGCGGAGGAGAATTTTTCTTCAAGCCTAAATCCACGGTTAAGCGCTCGATCGAAGAGCATTCCAGCGACGTCGAGGATTTCTAGGGTTTCATCTCATCTCCATGATTGA 1092 0.4799 MERDSKPNNSTEDHDIVSVLENPGPKIPKLSYLWRLYEEHYPPGFLRKVVAEIIATFLLVFVACGSAALSTSDEHKVSKLGASIAGGLIVTVMIHAVGHVSGAHMNPAVTLAFAAIRHFPWRQVPFYAAAQLTGAIVASFTLRELLHPIKNLGTTSPSGTEVQALVMEIVVTFSMMFITSAVATDTKAIGELAGIAVGSAVCITSILAGPISGGSMNPARTIGPAVASQHYKGIWVYVVGPVLGTLMGAWSYNLIRVSDKLVPGLLGNKVEAAPSRIIPQQYYTGFGTKRILHVDGRYRGSQVRCIRACEAVIDYKYKPQFRLFKEESAEENFSSSLNPRLSARSKSIPATSRISRVSSHLHD* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01076 363 CDD MIP 47 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 MobiDBLite consensus disorder prediction 1 20 - -
Eupl04g01076 363 Gene3D Glycerol uptake facilitator protein. 33 261 IPR023271 -
Eupl04g01076 363 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Eupl04g01076 363 PRINTS Major intrinsic protein family signature 235 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 PRINTS Major intrinsic protein family signature 47 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 PRINTS Major intrinsic protein family signature 167 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 PRINTS Major intrinsic protein family signature 198 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 Pfam Major intrinsic protein 45 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl04g01076 363 PANTHER AQUAPORIN NIP2-1 39 273 IPR034294 -
Eupl04g01076 363 FunFam Aquaporin NIP2-1 38 263 - -
Eupl04g01076 363 SUPERFAMILY Aquaporin-like 39 257 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01076 Eupl-Chr4 16509165 16514081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01076 47 260 Major Intrinsic Protein MIP AT5G37820 50.000 1.39e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01076 K09874 - nnu:104598127 427.172