Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01040 ATGGAAGGAGAAAATGGGATGCGTAGGCCGAATTTTCCATTACAGTTACTAGAGAAGAAGGAAGAAGATGTATGCTCAAGCTCGGGATATCCATCGTTAGCGATATCGGCCGAAACAAGCGCGATCCGATCGAATTCTAGTCTACAAATTACGGAGGCATCAAAGAAGCCCCCTCCGAAAAGGACTTCAACTAAGGATCGACATACCAAGGTTGATGGTCGGGGACGTCGCATACGTATGCCCGCTACATGTGCCGCTAGGGTCTTCCAATTGACTAGAGAGCTAGGCCATAAGTCCGATGGCGAAACAATTGAATGGTTACTTCAACAAGCCGAACCTGCGGTGATCGCCGCTACCGGAACTGGTACAATTCCGGCCAATTTCACGTCTCTCAACATCTCTCTTCGTAGCTCGGGGTCTAGTATGTCGGCGCCATCGCAACTTCGGAGTGCTTACTTCAATCCAAATTTTGCGACGCCACAATTAAGGATGAGAAGCGAATGGGAACGGAGTATCGATGAGTCTCAACGTCGAATTCTATTCCCCGCGGGCTTCGGTTACTCATCGGAGAACTCCTCTACACTATTCAATTATCATACTAACAATGTAAACCCTATGTTACATGCTAAGCAGGAGTTGCGTGATCCATGTCTAGACATGTCGGACACAGAAGTAAGTATAGGAAGGAAGCGGCTCGAGCAAGAAAGTTCATCACAACAACAAATGGGAAGCTACTTGTTGCAATCAAACACTGGTTCGGTCCCGGCAAGTCATAGTCAGAGTCCGGCGACTTTTTGGATGGTTACTAACCCTAACAACCAAGTGATTAGTGGTGACCCTATATGGACATTCCCTTCTGTTAGTAACACAAATATGTATAGAGGGTCAATGTCTAGTGGGCTACATTTTATGAATTTCCCTACCCCAGTTGCTATGTTGCCTGGCCAACAGTTGGGTCCGGGTACTGGCAGTGGCGGTGGCGGTGGCATGGCTGAGGGTCACTTGGGCATGCTCGCGGCACTTAACGCATATCGGTCTCTTCCAGGCACCAGCGCTTCTGAGACTCCGGCGAGCGGCTCGCATTCGCACCATGGAGGGAATGAACGACATGACACAACTAGCTAG 1125 0.4907 MEGENGMRRPNFPLQLLEKKEEDVCSSSGYPSLAISAETSAIRSNSSLQITEASKKPPPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSAPSQLRSAYFNPNFATPQLRMRSEWERSIDESQRRILFPAGFGYSSENSSTLFNYHTNNVNPMLHAKQELRDPCLDMSDTEVSIGRKRLEQESSSQQQMGSYLLQSNTGSVPASHSQSPATFWMVTNPNNQVISGDPIWTFPSVSNTNMYRGSMSSGLHFMNFPTPVAMLPGQQLGPGTGSGGGGGMAEGHLGMLAALNAYRSLPGTSASETPASGSHSHHGGNERHDTTS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01040 374 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 51 370 IPR005333 GO:0003700
Eupl04g01040 374 MobiDBLite consensus disorder prediction 348 362 - -
Eupl04g01040 374 MobiDBLite consensus disorder prediction 44 71 - -
Eupl04g01040 374 Pfam TCP family transcription factor 62 241 IPR017887 -
Eupl04g01040 374 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Eupl04g01040 374 MobiDBLite consensus disorder prediction 348 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01040 Eupl-Chr4 15958218 15960450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01040 53 317 TCP Transcription Factor Family AT3G47620 46.224 7.05e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl04g01040 TCP 3.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01040 - - nnu:104597313 556.214