Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01037 ATGGTTTCAGAGATTTGTGCTCCGATGGATAACGAGGTCAATTTGGTGGCGGAGAACCAGGTTAGCAGGTCTTTCCCTAATAAAAAGAACCGTGGGAAAATTCCAAAGAAAATTCACAAGGCTGAGAGGGAGAAACTGAAACGTGACCATTTGAATGAACTCTTTCTCGAGCTGGGCAATGCTCTTGAATCAACTCAGCAGAACAATGGCAAGGCCTCTATATTGGGTGATGCCACTCGATTACTACGTGATCTGCTCACTCGGCTTGAATGTCTCAAAAGGGAGAATGCGGCTCTGTTATCGGAATCTCACTATGTAACTGCTGAGAAGAATGAGCTGAGAGATGAGAATTCTGTCCTAGAAGCTGAGATTGAGAAGCTGCAAACCCAGCTTCAAGAGAGGACTCAGTCCAAACCTGCTTGGGATGCAGCTCCTGCCCAATTGCAGCACACCAACTCAGCATCACAGTTGCAAGAGGATTGTCTGACATTGCCTGTTGTGGACCCTGCATTGCAGTCACTTCCTGTCACAGCTCCTGTTTTCGTCATCCCCCTCCATCATGATCTCCAAGCTTACCCAGAACCTGAAACTGCACAGGCTTCATCTAAGGTTCCCTCAAATGTGAGTAGACCACATGCTCGGTATCCCACCCCATCAGATTCGTGGCCATCTCAACTGCTTGCCAAGCAACCAGAAACAACTCAGGTAACCCAGCTTAGTTGCAATAGCACTAGCACCAGCAGAGATGAACAAGGCTCACGCAATGCGTAA 771 0.4786 MVSEICAPMDNEVNLVAENQVSRSFPNKKNRGKIPKKIHKAEREKLKRDHLNELFLELGNALESTQQNNGKASILGDATRLLRDLLTRLECLKRENAALLSESHYVTAEKNELRDENSVLEAEIEKLQTQLQERTQSKPAWDAAPAQLQHTNSASQLQEDCLTLPVVDPALQSLPVTAPVFVIPLHHDLQAYPEPETAQASSKVPSNVSRPHARYPTPSDSWPSQLLAKQPETTQVTQLSCNSTSTSRDEQGSRNA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01037 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 85 IPR011598 GO:0046983
Eupl04g01037 256 Gene3D - 33 110 IPR036638 GO:0046983
Eupl04g01037 256 MobiDBLite consensus disorder prediction 132 152 - -
Eupl04g01037 256 Coils Coil 110 137 - -
Eupl04g01037 256 MobiDBLite consensus disorder prediction 195 256 - -
Eupl04g01037 256 Pfam Helix-loop-helix DNA-binding domain 36 85 IPR011598 GO:0046983
Eupl04g01037 256 PANTHER TRANSCRIPTION FACTOR BHLH47 1 253 - -
Eupl04g01037 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 113 IPR036638 GO:0046983
Eupl04g01037 256 Coils Coil 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01037 Eupl-Chr4 15930423 15934182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01037 1 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 43.210 2.71e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01037 - - tss:122671970 330.102