Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01032 ATGGAAACTCTGGGTCCGGTGAACAAGCAAGCTTTACTCAGCGAGACGTCCCCTGGAAAACAACTTTCCATGGAGGAGAGCTGTGAGAATTCACATTCAAACAATTCTCCGTTAATTCCTCCCCAGCCGTACAATGTAGAAGGTCCCGTGAACGAGCAAGCTTTACACAGCGAGATGTCCCCTGGAAACAAACCTTCCATGGAGGAGAGCTGTGAGAATTCACATTCGAACAATTCTTTGTTAATTCCTCTGCAGCCGTGCAACGTTGAAGGTCCGGTGAACGAGCAAGCTTTACACAGCGACACGTTCCCTGGAAACAACCCTTCCATGGAGGAAAGCTGTGAGAATTCTCATTCGAACAATTCTCCGTTAATTCCTCCTCAGCCGTGCAACGTTGAAGGTCCAGCAAGCAATAGCACCGGAAATGATGATGTAGCGAAGAAGGCACTTTATAATTTTGGTCAAAGAACATCGAAATATCGCGGAGTAGCTATACACAAATCGACTGGGAAATATGAAGCGCACCTTTGGGATAACAGTGCGATAAATGAAGGCCGTGTAGGCAAAAAACGGAAAGGGAAACAAGTATATCTAGGTGGATATGAGACAGCGGAGAAAGCAGCACGGGCATATGACCTTGCAGCATTGAAATACTGGGGTCAAGGTGCAAATACCAAGTTGAACTTCCCACTTTCTAACTATGAGAAAGAACTCGAGGAAATGAGCAACATGTTGCGAGAGGAGTATATCAATTCGCTTAGAAGGAAAAGCATTGGTTTTACAAGAGGTCATTCCATTTACAGAGGAGTGACAAGACAACATGAAGGGAGACGATGGCAAGCTAGAATTGGCCGGGTTGCAGGTGGTAAAGACATCTACCTCGGAACATATGATACACAGGAAGAAGCTGCGGAGGCCTACGATATTGCTGCAGTTAAACTCCGAGGCATGAATGCGATAACAAATTTTGACATCAGTAATTACTACAAAGAGGGTTCAAAAGAATTGGCGGTTATCCCAATTAATTTTGCCGAGGAAGAGAACTCCACTGTAACTGTGAGGAGGTTCACACTATCTACTACTTGA 1086 0.4503 METLGPVNKQALLSETSPGKQLSMEESCENSHSNNSPLIPPQPYNVEGPVNEQALHSEMSPGNKPSMEESCENSHSNNSLLIPLQPCNVEGPVNEQALHSDTFPGNNPSMEESCENSHSNNSPLIPPQPCNVEGPASNSTGNDDVAKKALYNFGQRTSKYRGVAIHKSTGKYEAHLWDNSAINEGRVGKKRKGKQVYLGGYETAEKAARAYDLAALKYWGQGANTKLNFPLSNYEKELEEMSNMLREEYINSLRRKSIGFTRGHSIYRGVTRQHEGRRWQARIGRVAGGKDIYLGTYDTQEEAAEAYDIAAVKLRGMNAITNFDISNYYKEGSKELAVIPINFAEEENSTVTVRRFTLSTT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01032 361 SUPERFAMILY DNA-binding domain 158 232 IPR016177 GO:0003677
Eupl04g01032 361 MobiDBLite consensus disorder prediction 1 143 - -
Eupl04g01032 361 SMART rav1_2 266 330 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 SMART rav1_2 159 236 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 ProSiteProfiles AP2/ERF domain profile. 159 230 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 116 334 - -
Eupl04g01032 361 MobiDBLite consensus disorder prediction 56 84 - -
Eupl04g01032 361 CDD AP2 158 232 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 ProSiteProfiles AP2/ERF domain profile. 266 324 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 Pfam AP2 domain 266 316 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 Pfam AP2 domain 158 220 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 Gene3D AP2/ERF domain 266 326 IPR036955 GO:0003700|GO:0006355
Eupl04g01032 361 Gene3D AP2/ERF domain 158 232 IPR036955 GO:0003700|GO:0006355
Eupl04g01032 361 MobiDBLite consensus disorder prediction 99 143 - -
Eupl04g01032 361 Coils Coil 231 251 - -
Eupl04g01032 361 CDD AP2 265 326 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 MobiDBLite consensus disorder prediction 9 41 - -
Eupl04g01032 361 PRINTS Ethylene responsive element binding protein signature 306 326 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 PRINTS Ethylene responsive element binding protein signature 267 278 IPR001471 GO:0003700|GO:0006355
Eupl04g01032 361 SUPERFAMILY DNA-binding domain 265 326 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01032 Eupl-Chr4 15800997 15810678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01032 260 331 AP2-EREBP Transcription Factor Family AT5G57390 43.750 4.23e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Eupl04g01032 AP2 6.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01032 K09285 - psom:113297997 337.421