Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01011 ATGAAGCTCCATGAAGTTCCTAAGTCGGAGACTACAAAGCAGAAAGAACGACATATCGTTACGTGGACTCAACAGGAGGACGATATACTCCGAGAGCAGATCAGCATCAATGGAACTGAAAACTGGGCGGTTATTGCAGCTAAATTCAAGGATAAAACAACCAGACAGTGCAGAAGAAGATGGTACACTTACTTAAATTCAGATTTCAAGAAGGGAGGCTGGTCACCAGAGGAAGACATGATCTTATGTGAGGCACAGAAGATATTTGGTAACAGGTGGACTGAAATTGCGAAGGTAGTTTCGGGCAGAACGGATAATGCTGTGAAGAATCGGTTCTCTACTTTGTGCAAGAAACGAGCAAAGCATGAGGCCTTATCAAAGGAGAACAGCAGTTCATTCATGAACCAGAACAATAAGAGGGCTATATTTCAAAATGGATTCATTACAGACAGAACATCTGAATCTGCAGCACCTCTTAAGAAAATGAGGACCCACATCTCCAATCTCACAGAAAATGGCAACCCCAAAGGCAGATTACTTGAGCAATGTGGAACCACGGAAAATCAGCAGCTAAGACCTCCTTTTGCAGTACTGGTCCAAAACTTCAACAATGTTGGCGATTTGCCAGCTCAGCAACACGTCAACAACACCACCAGCACAGCCTCTAATGATGCAGTGGGTAACAACAAGGTTCAAGGAACATTTCTCAAGAGGGATGATCCGAAGATCACTGCTTTGATGCAACAAGCAGAACTGCTCAGCTCGCTCGCGCTAAAAGTTAATACAGAGAACACCAATCAAAGCCTTGAAAATGCTTGGAAGGAACTCCAAGAATTCTTAAATCGAACAAACGAGAGCGAACTGCTCAGATATAAATTTTCAGAAACTGATTTTCCACTCGAAGATTTCAAGGACTTGGTAGAGGACTTAAAGGGTTGTAACATGGGGAGTCGTCCATGTTGGAGGCAACCTGATCTATATGAGGAGTCTCCAGGCAGTTCTGAGTACAGCACAGGATCAACTATGCAGTCTCATACAGCAGGTGACAAAACAGAACAACCTCAATCTGAGGTATGTTCACTACACCAGGATATCGCTGTTGAACCACAGTCAATTCATACAGAAGTAGAGAACGGTGGTGATGGTTGCGGTGGGTTTTGCACTGGCACTGGCACAATTGTTACCAGTGTTGGGCAGCAGTCAATTCACATGGAGGTAGAGAATGGTGGTGGTGGTGGTGGTGGTTGTGCAGACAGGTTCTGCCCTGTCACAAGTGTTGCTCAAGTGGTGATCTTGCCGTCCTGTGATGAACCTAAAAACAATGATGGAGTCGTTTCTGCTTTGTCAAATACAGAGTTCAGTTCCCCTCTTCAAGTAACCCCACTTTTCCGAACATTTGCAGCAGCAATTCCAAGCCCAAAATTTTCAGAAAGTGAGAGACACTTCTTATTGAAAACACTTGGTTTGGCATCCCCGTCCCCCAACCCAAGCATCAACCCTTCTCGACCGCCTCCCTGCAGAAGGGCCCTCCTCCATAGTCTCTAA 1545 0.4511 MKLHEVPKSETTKQKERHIVTWTQQEDDILREQISINGTENWAVIAAKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMILCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALSKENSSSFMNQNNKRAIFQNGFITDRTSESAAPLKKMRTHISNLTENGNPKGRLLEQCGTTENQQLRPPFAVLVQNFNNVGDLPAQQHVNNTTSTASNDAVGNNKVQGTFLKRDDPKITALMQQAELLSSLALKVNTENTNQSLENAWKELQEFLNRTNESELLRYKFSETDFPLEDFKDLVEDLKGCNMGSRPCWRQPDLYEESPGSSEYSTGSTMQSHTAGDKTEQPQSEVCSLHQDIAVEPQSIHTEVENGGDGCGGFCTGTGTIVTSVGQQSIHMEVENGGGGGGGCADRFCPVTSVAQVVILPSCDEPKNNDGVVSALSNTEFSSPLQVTPLFRTFAAAIPSPKFSESERHFLLKTLGLASPSPNPSINPSRPPPCRRALLHSL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01011 514 CDD SANT 74 115 IPR001005 -
Eupl04g01011 514 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 65 IPR017930 -
Eupl04g01011 514 FunFam Transcription factor MYB124 14 70 - -
Eupl04g01011 514 Gene3D - 10 70 - -
Eupl04g01011 514 Pfam Myb-like DNA-binding domain 22 80 - -
Eupl04g01011 514 CDD SANT 21 65 IPR001005 -
Eupl04g01011 514 ProSiteProfiles Myb-like domain profile. 22 65 IPR001005 -
Eupl04g01011 514 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Eupl04g01011 514 MobiDBLite consensus disorder prediction 330 352 - -
Eupl04g01011 514 Gene3D - 72 143 - -
Eupl04g01011 514 MobiDBLite consensus disorder prediction 321 352 - -
Eupl04g01011 514 SUPERFAMILY Homeodomain-like 18 112 IPR009057 -
Eupl04g01011 514 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Eupl04g01011 514 SMART sant 18 67 IPR001005 -
Eupl04g01011 514 SMART sant 70 118 IPR001005 -
Eupl04g01011 514 PANTHER MYB PROTEIN-RELATED 21 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01011 Eupl-Chr4 15487068 15495010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01011 60 514 MYB Transcription Factor Family AT1G14350 49.453 5.53e-137 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl04g01011 Myb_DNA-bind_6 7.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01011 K09422 - nnu:104597103 694.886