Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01006 ATGGGCAACTGTTTGGATGCTTCTGCGAAAGTAGATAATGCTCAGAGTTCCCACACTACTTCCGGGGGCTCAAAAATTACCAGCAAAACTGGCCTATCTTCAGCTTCATCCAGTCTGACTATCCCATCTTACAGCGAAAAGAGTGCCACTGGAGGTCTTCCTACTCCGAGATCTGAAGGTGAGATTTTGTCATCCCCGAATCTGAAGGCATTCTCCTTTAGTGAGCTGAAGAATGCCACTAGAAACTTCCGTCCTGACAGTCTTCTAGGAGAAGGAGGATTCGGTTATGTTTTTAAAGGATGGATCGATGAGCAAACTCTTGCTGCCTCCAGGTCTAGGTCTGGGATGGTTATCGCTGTCAAGAAGCTTAAACCTGAAGGTTTCCAAGGCCACAAGGAATGGTTGACAGAAGTTAACTATCTTGGCCAACTTCATCATCCAAATTTGGTTAAACTCATTGGATACTGTGTGGATGGTGAGAACCGGCTTTTGGTCTATGAATTCATGCCAAAAGGCAGCTTGGAGAATCATCTATTTAGAAGAGGGCCTCAGCCACTTTCATGGGCAATAAGGATCAAAGTTGCCATAGGTGCTGCTAGAGGGCTCTGTTTCTTGCATGATGCTGAGTCTCAAGTGATATATCGTGACTTCAAAGCATCCAATATCCTTCTAGATGCGGAATTCAATGCAAAGCTTTCTGACTTTGGCTTGGCGAAGGCAGGCCCTACTGGTGACATGACTCATGTTTCCACACAAGTCATGGGTACTCATGGCTATGCAGCACCTGAATATGTTGCCACAGGTCGTCTATCTGCAAAGAGTGATGTTTACAGCTTCGGGGTTGTGTTGTTGGAACTTCTGTCTGGGCGTCGTGCAGTAGATAAGACAAAGGTTGGTATAGAGCAAAATCTAGTGGACTGGGCAAAGCCATATTTGGGTGACAAGCGCAAGTTATTCCGGATTATGGACACCAAGTTGGAGGGTCAGTACTCCCAGAAAGGAGCCTACCTGGCTGCCACCCTCGCCTTGCAGTGCCTCAACACTGAAGCCAAAGTTCGACCACGTATGTCTGAGGTCTTAGCAATGCTAGAACAGCTCCAAGCGCCAAAGAATGCAGCCAAACAGTCCCAAACAGAACAGAAAACAACCTCCATTCCCCTTCGCAAATCACCAATGAGAAACCATCCTTCCTCTCTCAACATTACACCCGGTCGGTCCCTGTTGTCATCCCACAGGCAATCACCACGCGTTCGCTAA 1257 0.4726 MGNCLDASAKVDNAQSSHTTSGGSKITSKTGLSSASSSLTIPSYSEKSATGGLPTPRSEGEILSSPNLKAFSFSELKNATRNFRPDSLLGEGGFGYVFKGWIDEQTLAASRSRSGMVIAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCVDGENRLLVYEFMPKGSLENHLFRRGPQPLSWAIRIKVAIGAARGLCFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDMTHVSTQVMGTHGYAAPEYVATGRLSAKSDVYSFGVVLLELLSGRRAVDKTKVGIEQNLVDWAKPYLGDKRKLFRIMDTKLEGQYSQKGAYLAATLALQCLNTEAKVRPRMSEVLAMLEQLQAPKNAAKQSQTEQKTTSIPLRKSPMRNHPSSLNITPGRSLLSSHRQSPRVR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01006 418 MobiDBLite consensus disorder prediction 9 52 - -
Eupl04g01006 418 MobiDBLite consensus disorder prediction 1 63 - -
Eupl04g01006 418 Gene3D Phosphorylase Kinase; domain 1 59 168 - -
Eupl04g01006 418 Pfam Protein tyrosine and serine/threonine kinase 87 362 IPR001245 GO:0004672|GO:0006468
Eupl04g01006 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Eupl04g01006 418 ProSiteProfiles Protein kinase domain profile. 83 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01006 418 PANTHER OS01G0588500 PROTEIN-RELATED 32 367 - -
Eupl04g01006 418 SUPERFAMILY Protein kinase-like (PK-like) 61 366 IPR011009 -
Eupl04g01006 418 ProSitePatterns Protein kinases ATP-binding region signature. 89 122 IPR017441 GO:0005524
Eupl04g01006 418 Gene3D Transferase(Phosphotransferase) domain 1 169 390 - -
Eupl04g01006 418 FunFam Serine/threonine-protein kinase BIK1 52 168 - -
Eupl04g01006 418 CDD STKc_IRAK 89 366 - -
Eupl04g01006 418 MobiDBLite consensus disorder prediction 369 418 - -
Eupl04g01006 418 FunFam Probable serine/threonine-protein kinase PBL8 169 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01006 Eupl-Chr4 15367473 15374773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01006 61 363 Glycoside Hydrolase AT3G07070 54.248 1.31e-112 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl04g01006 PK_Tyr_Ser-Thr 4.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01006 - - vvi:100253317 697.197