Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00992 ATGGCGGATTCATCACATGGGCCCGCAAGTTTCTTGACGCAGGCGAACGCTTTGCTTAGGAAGAACCTTACTTTCCAGAAACGTAATCTCAGGACAAATGTTAGGCTTGTCACATTCCCATTTTTCCTCTGTGTGCTGCTTGTTGTCATCCAAAATTTGGTTAACAAACAATTGGATAAGGATGAGAACAAGTGTGGCTGTATCTGTATTGACAGAAATGGAGATGGTACATGTGAGAAAGTGTGTGGGATACAGTACTCTACTTTGGATCAAGTGGGCACTTGTCCCATTCCTAGCCCTCCGCAATGGCCAGCTTTGTTGCAAACACCCAGTCCTGAATATCGTGCCATAAGAACTGATTTCATTCCATTTACGGACTTGCCAGACGAGTCGTGCAAGAGGACAGGTTCCTGCCCAGCAACTATACTTCTAACTGGGGGTAATCGATCTCTGGGAGAAAGCTTGGCGGGGAATTTATTTACAAGTGGTTTTTCTCCCAATTCCTCTGACATTTTGAATACTTTAGCCAATCTTCTCCCGGGGACAGACACAAAAACCCAGTTGTCCAATTTTCTAGAACCAGCTTTCCTCTCAAATCGTCCCATGTATGTAGTTCAACCTCAGTGCACATCAAACTCTACATTTTCGATTCCCATCCAGATAGCATCCGTGACAATGCAACAAGAGGTAAGATGCGTGCAAGGTTTACATCTATGGCGCAATAGTTCTTTAGAGGTAAATGATGAGCTGTTTAAGGGCTACCGACAAGGAAATCCAGAGAGGAAGATAAATGAGATCATTGCAGCTTACGATTTCTTAAACTCAAATGAGAATAACTTCAATGTGAGCATTTGGTACAACTCGACCTATAAGAATGACTCTGGGAGCGGTCCTCTCGGATTGGTGCGGGCTCCACGCTCAGTGAATGTGGTCTCCAATGCTTACCTCCAGTTCTTGAGAGGTACTGGTGTAAAGATGCTATTTGATTTTGTCAAAGAAATGCCCAAACCTGAAACACGACTCAGGCTGGATTTCTCTTCTCTTCTTGGTGCACTCTTCTTTACATGGGTCATTTTGCAACTTTTCCCTGTTATATTGACATCTCTGGTTTACGAGAAGCAACAAAATCTAAGAATCATGATGAAAATGCATGGGCTTGGCGATGTTCCTTATTGGACGATTTCCTATGCTTATTTTCTTTTCTTATCTTCAATCTACATCCTATGTTTTGTGGTATTCGGCTCTCTCATTGGTTTGAAGTTCTTCACGTTGAACGATTACAGCATACAGTTTGTGTTCTATTTCATCTATATAAACCTACAGATTTCGCTTGCTTTTCTAGTGGCAACAATTTTTTCAAATGTTAAAACCGCTACAGTATTGGGATACATATGCGTATTCGGATCAGGGCTCTTAGGAGGCTATCTTTTCCAGTCCTTTGTTGAAGACACATCATTCCCGAGAGGCTGGGTTGTAGTTATGGAGATTTTCCCTGGCTTTTCTCTATATCGTGGGCTATATGAGTTGGCACAATATTCGTTCAATGGATATTATATGGGGATTGATGGGATGCGGTGGAAAGATTTGAATGATGGCACGAATGGGATGAGAGAAGTCTTAATTATCATGTTTGTAGAATGGTTGATAGTGCTTCCTGTTGCATTTTATTTTGATCAAGTTGTGTCTTTAGGAAGTGGTGTCAGGAAGCACCCTTTGTTTTTCTTGCAAAACTTCCGAAAGAAGTCTTTGCCATCTTTTCGGAGGCCAAGTCTGCAGAGACAGGGATCAAAAGTTTTTGTTCAAATGGAGAAACCTGATGTTTCCCAAGAGAGGGAGAAGGTTGAACAGTTACTGCTTGAACCCAGTATGAGTCATGCCATTATCTGTGATAACCTCAAAAAGGTGTATCCAGGGATGGATGGAAACCCTGAGAAATTCGCAGTTAGAGGGTTGTCTCTTGCTTTGCCTCGAGGGGAATGCTTTGGTATGCTCGGTCCTAATGGTGCTGGAAAAACCTCTTTTATCAATATGATGATTGGGCTCATAATGCCAACCTCCGGCACAGCATTCGTTCAGGGCTTGGACATACGGACTGACATGGACAGAATATATACCAGCATGGGTGTATGCCCACAGCATGACCTGCTCTGGGAAACGCTAACAGGTAGGGAGCACCTACTATTTTATGGCAGACTGAAGAACCTCAAAGGGGCTGCCTTAACACAAGCAGTGGAAGAATCTCTGAAGAGTGCAAACCTATTTCATGGAGGTGTTGGTGATAAACAAGCTGGGGAATACAGTGGAGGTATGAAGAGGAGGCTTAGTGTTGCCATTTCTCTGATTGGAGATCCTAAAGTCGTCTATATGGATGAGCCTAGTACCGGATTAGATCCAGCTTCAAGAAACAATTTGTGGAAGGTTGTGAAACGTGCAAAGCAAGATCGGGCAATTATTCTCACCACGCATTCAATGGAAGAGGCAGAGGTACTATGCGACCGGTTGGGGATCTTTGTAGATGGCAGCTTGCAGTGCATAGGAAATCCAAAAGAGGTGGGGGTGGGACAGGGGGGTTGGGGTCAGCTTGATAGCTACCAAATCAGGCCTCTCAAGTCTAATTTAATGATTAGAGTTCAATGGGCAAGTTTAAAATCAAATAGAATGTATGTGCTTACACAGCTAAAGGTTAGATACGGAGGCTTGTATGTGCTTACAATGACAACATCTCCGAGTCAAGAGGAGGAGGTGGAGAACTTGGTACGCCAGCTCTCTCCAAATGCAAACAAGATCTACCACATATCTGGAACCCAGAAGTTCGAACTACCGAAGCAAGAGGTCAGACTTGCAGATGTTTTCCAAGCAGTTGAGAATGCAAAGAGCAAGTTAAAGATACATGCTTGGGGTCTGGCTGATACCACCTTGGAGCACGTCTTCATCAATGTTGCTCAAGGGGCCCAGGCGTTCAACGTGCCCTCACGATCGTACAGATGA 2988 0.4378 MADSSHGPASFLTQANALLRKNLTFQKRNLRTNVRLVTFPFFLCVLLVVIQNLVNKQLDKDENKCGCICIDRNGDGTCEKVCGIQYSTLDQVGTCPIPSPPQWPALLQTPSPEYRAIRTDFIPFTDLPDESCKRTGSCPATILLTGGNRSLGESLAGNLFTSGFSPNSSDILNTLANLLPGTDTKTQLSNFLEPAFLSNRPMYVVQPQCTSNSTFSIPIQIASVTMQQEVRCVQGLHLWRNSSLEVNDELFKGYRQGNPERKINEIIAAYDFLNSNENNFNVSIWYNSTYKNDSGSGPLGLVRAPRSVNVVSNAYLQFLRGTGVKMLFDFVKEMPKPETRLRLDFSSLLGALFFTWVILQLFPVILTSLVYEKQQNLRIMMKMHGLGDVPYWTISYAYFLFLSSIYILCFVVFGSLIGLKFFTLNDYSIQFVFYFIYINLQISLAFLVATIFSNVKTATVLGYICVFGSGLLGGYLFQSFVEDTSFPRGWVVVMEIFPGFSLYRGLYELAQYSFNGYYMGIDGMRWKDLNDGTNGMREVLIIMFVEWLIVLPVAFYFDQVVSLGSGVRKHPLFFLQNFRKKSLPSFRRPSLQRQGSKVFVQMEKPDVSQEREKVEQLLLEPSMSHAIICDNLKKVYPGMDGNPEKFAVRGLSLALPRGECFGMLGPNGAGKTSFINMMIGLIMPTSGTAFVQGLDIRTDMDRIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGAALTQAVEESLKSANLFHGGVGDKQAGEYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWKVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKEVGVGQGGWGQLDSYQIRPLKSNLMIRVQWASLKSNRMYVLTQLKVRYGGLYVLTMTTSPSQEEEVENLVRQLSPNANKIYHISGTQKFELPKQEVRLADVFQAVENAKSKLKIHAWGLADTTLEHVFINVAQGAQAFNVPSRSYR* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00992 995 Pfam ABC transporter 649 793 IPR003439 GO:0005524
Eupl04g00992 995 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524|GO:0016887
Eupl04g00992 995 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 598 985 IPR026082 GO:0016020|GO:0055085|GO:0140359
Eupl04g00992 995 Pfam ABC-2 family transporter protein 267 551 IPR013525 GO:0016020|GO:0140359
Eupl04g00992 995 FunFam ABC transporter A family member 7 616 891 - -
Eupl04g00992 995 Gene3D - 619 854 IPR027417 -
Eupl04g00992 995 SMART AAA_5 657 840 IPR003593 GO:0016887
Eupl04g00992 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 851 IPR027417 -
Eupl04g00992 995 CDD ABC_subfamily_A 627 850 - -
Eupl04g00992 995 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 864 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00992 Eupl-Chr4 15209965 15278309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00992 603 851 Calmodulin-binding Proteins AT2G36910 23.166 2.41e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00992 - - nnu:104586759 1583.54