Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00988 ATGGTGGAGTTGCAGAGAGGGTTACCTCTCTTGCTTCAGCAATTCAAAGCTCTGTTCAAGAAAAACCTCCTCCTCTCATGGCGGCACAAGAGATCCACCTTTCTGCAAATCTTCTCCTCTCTGTTCTTCCTATTTATCATCTTCTGCATCGAAAAAGCCATCAATTCTCGTTTCTCTTCCACGACCTCGTTCGACAACGTCTTCGATCCAGAGCCTCTAATCTCTCCTCCGATTCCTCCGTGCGAGGACAAGTACTTCGTTAAGGTTCCGTGTTTCGATTTCGTTTGGAGTGGAAACGGAAGCGCGAGGATTCAGTCGATCGTGAGAAATATCATGGAGAACAATCCAGGAAGACAGATTCCTTCGAGCAAGGTTAAATCATTTGGAACACCTGATCAAGTAGATGCTTGGCTTTTTAGTGATCCTATGCGCTGCCCTGGAGCTCTGCATTTTGTAGAAAGAAATTCTACTGTAATAAGCTATGGGATTCAGACTAACTCTACTCCTGTATCCAAACGAGGGAAGTTTGAAGATCCGACATTTAAATTTCAAATTCCACTTCAAATTGCTGCAGAGCGTGAGATTGCTAGGACTCTTATTGGAGATCCAAATTTTAGCTGGGTTGTTGGACTTAAGGAATTCGCACACCCTGCTGTCCAAACTTTCTCTGCTGTGGGCTCAGTAGGACCAACCTTTTTCCTTGCAATTGCCATGTTTGGTTTTGTGTTCCAAATTGGTTCTTTGATTGTGGAGAAAGAACTCAAACTTCGCCAGGCAATGTCTATGATGGGACTTTATGAATCTGCCTACTGGTTCTCGTGGCTCACTTGGGAGGCTTTTATCACACTTCTCTCATCACTTTTCACAGTTCTCTTCGGAATGATGTTTCAGTTCAACTTTTTCCTGCACAACAGTTTTGCAATTCTGTTCCTTGTGTTTTTCCTTTTCCAATCCAACATGATTGGTTTTGCCTTCATGGTGTCAACTTTCATTAGCAAATCAGCATCAGCAACTACTGTTGGGTTTTCCATATTTATTATTGGCTTTTTGACTCAGCTTGTTACCACATTTGGATTTCCCTACAGTAAAGACTACTCTAATACATATCGGGTCATTTGGTCTTTATTCCCTCCTAATCTTCTTGCGAAAGCTCTTAATTTGCTTGGAGATGCGACAGCCACTCCTGAAGGCGATGGGATTAGCTGGCGCAGACGAGCTGAGTGTCCACCATCTGAGTTCGACTGCGTGATAACTATTGATGACATATATAGATGGCTTGTGTCAACATTTGTTGTGTGGTTTATTTTGTCTATCTACTTCGACAATATAATTCCCAACTCATCCGGAGTGAGGAAATCATTGTTTTACTTTTTGAAGCTTGGGTACTGGACAGGGAAAGGTGGAAACAAGGTGGAAGAGGGTGGCATTTGTAGTTGCACAACTTTAATTCCACCATTGGAAGATGTCACTCCAGATGATCAAGACGTCCTTGAAGAGGCAAATGGTGTAAAACAGCAAGTGACAGAAAATGCAGTTGATCCAAATATTGCAGTTCAGATACGTGGTCTTGCAAAGACATATCCTGGGACAACAAATCTTGGTTGCTGTAAATGCAAGAGGACTTCACCTTACCATGCTGTTAAGGGTTTATGGGTGAACTTTGCAAAGGATCAATTATTTTGTCTTCTTGGACCCAATGGAGCTGGAAAAACTACTGTAATCAATTGTTTGACTGGCATTACACCGGTGACAGGCGGAGATGCATCGATCTATGGATATTCCATTCGAAACTCTGTCGGTATGTCAAACATTCGAAGGATGATTGGAGTCTGTCCTCAGTTCGATATTTTGTGGGATGTCTTATCTGGTCGAGAGCACCTCCATCTCTTTGCTAGTATTAAAGGCCTGCCCCCTTCTTCAATCAAATCGGTTGCTGAGAAATCACTAGCAGAGGTGAAACTCACTGATGCGGCCAAAATGAGATCTGGGAGCTATAGTGGAGGGATGAAGCGCCGGCTCAGTGTTGCAATAGCCCTGATCGGGGATCCAAAATTGGTCATCTTGGACGAGCCGACAACTGGTATGGATCCAATTACTCGAAGGCATGTATGGGACATTATAGAGGATGCAAAGAAAGGTCGGGCCATTGTCCTAACGACTCATTCAATGGAGGAAGCTGACATTTTAGGCGACCGCATAGCAATTATGGCAAAGGGGAAGCTCCGTTGCATTGGAACCTCAATCAGGTTGAAGTCACGGTTCGGGACTGGTTTTATTGCTAACGTGAGCTTCCTTGAAAGCACTCCTGGACAAACTCCTAATGTGAACGGGGATACAGTTGCTACAACTGAAGCTCATCATGAAGCTGTGAAGCAGTTCTTCAAATCTCATTTGGATGTGGTACCAAAAGAGGAGAACAAGGCCTTCCTTACTTACGTAATTCCTCATGAAAAAGAGGGTCTATTGACGAATTTTTTTGGAGAGCTTCAAGATAGAGAAAGAGAGTTCGGCATATCAGACATCCAACTTGGTCTTACAACTCTCGAAGAAGTGTTCCTGAATATTGCAAAGAAGGCAGAGCTAGAAAGTGCTATTGCTGATGGGAGCTTGGTAACTCTGACTTTAACATCTGGAACCTTGCTTCAGATACCTAGAGGAGCCAGGTTTGTTGGGATTCCAGGAACAGAAACTACAGAGAATCCGAGAGGTTTTATGGTTGAAGTATACTGGGAGCAAGATGAGACTGGTGCCCTCTGCATTTCTGGCCATTCATCTGAAACTCCAATACCTCCAAATGTTCAACCAATGGCTTCTTCTGCGGCCACTTCCCACAGGACTTTCTTGCGCAGGACACGACCAATTCATGGAATTGTGATTGATCCTGATCAAATCGAAGGTCCAAGTCATCAGTAA 2913 0.437 MVELQRGLPLLLQQFKALFKKNLLLSWRHKRSTFLQIFSSLFFLFIIFCIEKAINSRFSSTTSFDNVFDPEPLISPPIPPCEDKYFVKVPCFDFVWSGNGSARIQSIVRNIMENNPGRQIPSSKVKSFGTPDQVDAWLFSDPMRCPGALHFVERNSTVISYGIQTNSTPVSKRGKFEDPTFKFQIPLQIAAEREIARTLIGDPNFSWVVGLKEFAHPAVQTFSAVGSVGPTFFLAIAMFGFVFQIGSLIVEKELKLRQAMSMMGLYESAYWFSWLTWEAFITLLSSLFTVLFGMMFQFNFFLHNSFAILFLVFFLFQSNMIGFAFMVSTFISKSASATTVGFSIFIIGFLTQLVTTFGFPYSKDYSNTYRVIWSLFPPNLLAKALNLLGDATATPEGDGISWRRRAECPPSEFDCVITIDDIYRWLVSTFVVWFILSIYFDNIIPNSSGVRKSLFYFLKLGYWTGKGGNKVEEGGICSCTTLIPPLEDVTPDDQDVLEEANGVKQQVTENAVDPNIAVQIRGLAKTYPGTTNLGCCKCKRTSPYHAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPVTGGDASIYGYSIRNSVGMSNIRRMIGVCPQFDILWDVLSGREHLHLFASIKGLPPSSIKSVAEKSLAEVKLTDAAKMRSGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIEDAKKGRAIVLTTHSMEEADILGDRIAIMAKGKLRCIGTSIRLKSRFGTGFIANVSFLESTPGQTPNVNGDTVATTEAHHEAVKQFFKSHLDVVPKEENKAFLTYVIPHEKEGLLTNFFGELQDREREFGISDIQLGLTTLEEVFLNIAKKAELESAIADGSLVTLTLTSGTLLQIPRGARFVGIPGTETTENPRGFMVEVYWEQDETGALCISGHSSETPIPPNVQPMASSAATSHRTFLRRTRPIHGIVIDPDQIEGPSHQ* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00988 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 745 IPR027417 -
Eupl04g00988 970 CDD ABC_subfamily_A 518 751 - -
Eupl04g00988 970 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524|GO:0016887
Eupl04g00988 970 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 518 763 IPR003439 GO:0005524
Eupl04g00988 970 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 493 861 IPR026082 GO:0016020|GO:0055085|GO:0140359
Eupl04g00988 970 Gene3D - 505 763 IPR027417 -
Eupl04g00988 970 Pfam ABC-2 family transporter protein 224 439 IPR013525 GO:0016020|GO:0140359
Eupl04g00988 970 FunFam ABC transporter A family member 2 508 770 - -
Eupl04g00988 970 SMART AAA_5 556 740 IPR003593 GO:0016887
Eupl04g00988 970 Pfam ABC transporter 550 692 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00988 Eupl-Chr4 15166208 15173816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00988 560 777 Calmodulin-binding Proteins AT2G36910 23.377 1.76e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00988 - - nnu:104586758 1613.59