Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00983 ATGGGAAAATCTCCAGGAAAATGGATCAAGACCTTGCTTTTTGGGAAGAAAGCATCCAGATCTAATTTGTCAAAAGGAAGAGACACTTCGAAAGCTACAAATGAGAAAGAGGCATGGGTTGCTGCTAAGGGACCCACTGCTGATTTGGCCGTGGGAGCTCCCTCCATGTCACAGCCGGAACCTGTTACCAATGATAGAAGTGGTGGCAACTTCGAGTTGGAAAATGGGGTATTTTCCAATTTACCACGTGATGAGGCCGTCTTAGTGCCTGGAAATCAAAATGCGGATAAACAAGGAACCACAGGACCAAATGATCCAGAGAGAATTGAGGAAGAGCAAGCTGCTATAAAGGCACAGGCCGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTTCGAGCCCTCAAGGGCATCATAAGGCTCCAGGCACTTGTTCGTGGGCACTTGGTGAGGAGACAAGCTGTTGCCACTTTACGCTGTATGCAAGGAATTATAAAGTTACAGGCACTGGCTCGTGCTCGAAGGGTCAGACTTTGTGATACTGGTATGGAAGTGCATAAAAAATCCAGTCCCGGAAAGCCTCTGGATGCCAAGTGTTCAGATTCTTTTGGAGGCGACACATCTACTCGGACAAAGCTCACGTTAAATTCTTTTGTTAGTAAGCTTCTCGCTTCTTCACCCATTGCGATGCCTTTGCGCCTCCAGTATGATCTGGGGGATCCGAATTCATCCTGGAACTGGCTTGAACGCTGGACAGCCTCCCGTTTTTGGGAACCACTTCCACAACCGAAGAAGGTTGTTGATTCAAAATGTCAGACAAGGCGGGGGGGTTCTCAAAATGTAGAAATCGAGCCAGGTCGACCAAAGCGGAGTGTCCGAAGGGTACCTGCTGCAAATCTTGACAATAGCTTGATACATTCCACCTCTGAATCTGAGAAACCTAAACGCAGCCTGAGGAAAGTTTCAAGCCATCCAGTAGATTCAGTGCAAGAAAATCCACAAAATGAGCTTGAAAAAGTTAAACGCAGTCTGAGAAAAGTCTCTAGTTCCACAGCAGAGACTACTGACCGACTAGAGGTTGAGACTGAGAAGCCGAAGCGGACTCTGAGAAAGCCATCAAGCATCCCAGCTCCTGACATTCCAGACCAGGGCATGGGTGAGTCTGCTGAGACGATAAAGAAAGATACAACAGTGCCAGTGTCTAAACAACCTGATGTAGAAACTACTCCGGAACCATTGGCAGAAGATGGGCCGACTGATGTTTTACATGATGATCATGCTGCAGTGGAATTACCACCTTTGGAGAGCTGTGGGAAAGATGAAAATATCCCTGTAATGAATGGGGAGTTAATCTCTAAGGAAGATCAAACTAGCATTGAGAACCAGAAAACAAGCAGGAGGAGAGCTTCATTCCCAGCAAAGCAGGAATATCCAGAGAATGGTGTACAGAACACTCCAACATTGCCAAGCTATATGGCAGCAACTGAATCTGCAAAGGCGAAGCTGCGAGGGCAAGGCTCCCCAAGGATTGATGAAGATGGGGCTGAGAAGAATGGTTTCACCAGACGGCATTCTCTGCCATCTTCAACCAATGGAAAATTGAGCTCACTGTCGCCACGGACACACAGACTGGTTCAAGCAAGTGGCAAAGGAGGCATTAAAAATGATAGATCTTTATTGTCTTCTAAAGATGGTAAGCATCTTGGGATTTTCTTCTTATCCTTATTCTTTTAG 1731 0.4662 MGKSPGKWIKTLLFGKKASRSNLSKGRDTSKATNEKEAWVAAKGPTADLAVGAPSMSQPEPVTNDRSGGNFELENGVFSNLPRDEAVLVPGNQNADKQGTTGPNDPERIEEEQAAIKAQAAFRGYLARRAFRALKGIIRLQALVRGHLVRRQAVATLRCMQGIIKLQALARARRVRLCDTGMEVHKKSSPGKPLDAKCSDSFGGDTSTRTKLTLNSFVSKLLASSPIAMPLRLQYDLGDPNSSWNWLERWTASRFWEPLPQPKKVVDSKCQTRRGGSQNVEIEPGRPKRSVRRVPAANLDNSLIHSTSESEKPKRSLRKVSSHPVDSVQENPQNELEKVKRSLRKVSSSTAETTDRLEVETEKPKRTLRKPSSIPAPDIPDQGMGESAETIKKDTTVPVSKQPDVETTPEPLAEDGPTDVLHDDHAAVELPPLESCGKDENIPVMNGELISKEDQTSIENQKTSRRRASFPAKQEYPENGVQNTPTLPSYMAATESAKAKLRGQGSPRIDEDGAEKNGFTRRHSLPSSTNGKLSSLSPRTHRLVQASGKGGIKNDRSLLSSKDGKHLGIFFLSLFF* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00983 576 MobiDBLite consensus disorder prediction 49 75 - -
Eupl04g00983 576 MobiDBLite consensus disorder prediction 307 321 - -
Eupl04g00983 576 MobiDBLite consensus disorder prediction 355 369 - -
Eupl04g00983 576 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Eupl04g00983 576 SMART iq_5 133 154 IPR000048 GO:0005515
Eupl04g00983 576 SMART iq_5 110 132 IPR000048 GO:0005515
Eupl04g00983 576 MobiDBLite consensus disorder prediction 447 487 - -
Eupl04g00983 576 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Eupl04g00983 576 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
Eupl04g00983 576 PANTHER IQ-DOMAIN 5-RELATED 1 532 - -
Eupl04g00983 576 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Eupl04g00983 576 MobiDBLite consensus disorder prediction 266 419 - -
Eupl04g00983 576 MobiDBLite consensus disorder prediction 504 519 - -
Eupl04g00983 576 MobiDBLite consensus disorder prediction 500 555 - -
Eupl04g00983 576 Pfam Protein of unknown function (DUF4005) 473 553 IPR025064 -
Eupl04g00983 576 MobiDBLite consensus disorder prediction 458 472 - -
Eupl04g00983 576 MobiDBLite consensus disorder prediction 57 74 - -
Eupl04g00983 576 MobiDBLite consensus disorder prediction 521 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00983 Eupl-Chr4 15069984 15080324 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00983 1 564 IQD Protein Family AT1G74690 43.792 2.95e-120 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00983 - - nnu:104586757 728.783