Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00981 ATGGAGAAATATCTCACTTCGACCAGTTTCATGTTTGCAAATCTACTTTTCTTTCTACTTCTCCCGATCTCCTCTGGGCAATTAACGCCATCTGAAATTCGAATCCTCTTTCGAGTCCAACAGCTTCTAGAGTTCCCACCTGCTCTTCAGGGATGGTCCAACTGGACCAACTTCTGTTACCTCCCTCCTTCTCCTTCTCTCACAATTATCTGCTCAGGAAACCACATAACCGAATTAACTGTCATTGGCAACAAGAGTTCCCCTTCTCTCAGCCCAAAACCAGCTCGAGGAAACTTCGCCGTTTCTCAGCAAACATTGTCTGAGAGATTCTCAAGCGACTCGTTCTTCACCACTCTTACCAAACTCTCGAGCTTGAAGGTGCTGTCGCTCGTGTCGTTGGGGTTGTGGGGTCCATTACCCAGGAAGATCAATCGCTTCTGGTCACTTGAAGTGCTGAATGTGAGTTCAAATTTCATTTACGGACAGATCCCATCATCGGTTTCGTCGTTAAAGAACCTTCGAAGTCTTGTTTTGGATGATAATTTGTTCAATGGGACTGTTCCAGATCTTAGTACCTTGGCAGTTCTAGAAGAACTGGATGTAGGTAGCAATCTTCTAGGACCTGAATTTCCCTCTCTGGGGAACAAGGTTGTGAGTCTCATATTGAGAAACAACACATTTCGATCTCACATTCCTTCCAAACTCAAGAACTTTGATCAGCTGCAGCGATTCGACATCTCTTCCAATGAATTCGACGGAACTATCCCATCTACCCTGTTTTCTCTACCATCAATTGAGTACCTGAACTTGGCTAGAAATAAACTGACTGGGGCCCTTACGACGAATTTTTCGTGCAGCAGTAGACTTGGGTTTGTGGATCTTTCTCACAATCTTTTGATTGGAAAATTGCCCCTCTGCATTAGATCTAATTCGTCGAACCTAGTCGTGCTCAATTCATGGAATTGTTTGTCTGTCGGGGACTCCAATTATCAACACCCAAATTCCTTCTGCCACGAAGAAGCACTAGCTGTTAAGCCTCCACCAATCCAGGACAACAAGAAAGGATCGATGAGCAAGCTAGTCCTCATACTTGTTATTGCTGGGGCTGTTGTAGTAGTAGGAGTTGCATTTGGGTTGTTAACATTGCTGATTTTCGGGAGGATGGGCGCAAGGACGGCAGAAAGGAACACATTTGACAAATCAGTTACTGAAAGAACTTCTGTTAGACTCTCCCCCAAACTACTCACTGATGCAAGGCATGTGTCTCCAGCAATGAGGTTGGGGACACTTGGGCTCCCACCATATCGTATTTTCACTTGGGAGGAAATTGAAGAAGCAACAAATAACTTCGAGACGTCGAATTTGATCGGAGAAGGAACTCAGGGTCAGCTTTACAAAGGTTGGCTCCGAGATAGTTCCTTAGTCGTTGTGAGATGTTTGAAATTAAAGCAGAAGCATTCACCTCAGAGCTTATTGCGACACATGGAAGTGATATCGAAGCTCAGGCATCGGCATTTGGTTAGCATTATTGGACACTGTATCGTTACTCATCAAGACTACCCCAATGCAGCTAACACCATCTTTCTTGTCTTCGAATATATTTCAAATGGGACGCTACGGAATCATCTTACAGACTGGAGAAAGCGCGACATGCTGAAATGGCCGCAGAGAATGGCGGCTACTATTGGTGTTGCGAGGGGAATCCAGTTCTTGCATACTGCAGTTACACCTGGTATTTTTGGTAACAATCTAAAGATTGAGAACATTATGGTGGATGAGAATCTCACAGCAAAAATTAGTAGCTATAATCTGCCAATGCCAGCTAAGGTAGGTTCAGAAAGCCCTTTCAATGGAGTAGAAACACCTGATCGTCTTGACAGTGCTGAACATGGCGAAAAAGACGATATTTATCAGCTGGGGGTTATTCTACTGGAACTTATAACGGGTAAACCAATCACATCCCAGAGCGAATTGGAGGTGCAGAGAGCTCAGCTAGAGACGGGCTTAAGAGACTCAAAACTACGTGGGATGGCGGATCCGTCCATTCTTGGTACATTTGCCTACCAGTCACTAAAAACCACAGTTGAAATCACCATAAACTGTCTATCCAGAGATCCTAGCCAGCGGCCATCAATAGAAGATATTCTCTGGAATTTGCAGTATTCAGTTCAAGTTCAAGAGGGATGGACAACCAGCAGTGAAATCCTTACACAGTCATATAGCTTCAGTTAA 2232 0.4435 MEKYLTSTSFMFANLLFFLLLPISSGQLTPSEIRILFRVQQLLEFPPALQGWSNWTNFCYLPPSPSLTIICSGNHITELTVIGNKSSPSLSPKPARGNFAVSQQTLSERFSSDSFFTTLTKLSSLKVLSLVSLGLWGPLPRKINRFWSLEVLNVSSNFIYGQIPSSVSSLKNLRSLVLDDNLFNGTVPDLSTLAVLEELDVGSNLLGPEFPSLGNKVVSLILRNNTFRSHIPSKLKNFDQLQRFDISSNEFDGTIPSTLFSLPSIEYLNLARNKLTGALTTNFSCSSRLGFVDLSHNLLIGKLPLCIRSNSSNLVVLNSWNCLSVGDSNYQHPNSFCHEEALAVKPPPIQDNKKGSMSKLVLILVIAGAVVVVGVAFGLLTLLIFGRMGARTAERNTFDKSVTERTSVRLSPKLLTDARHVSPAMRLGTLGLPPYRIFTWEEIEEATNNFETSNLIGEGTQGQLYKGWLRDSSLVVVRCLKLKQKHSPQSLLRHMEVISKLRHRHLVSIIGHCIVTHQDYPNAANTIFLVFEYISNGTLRNHLTDWRKRDMLKWPQRMAATIGVARGIQFLHTAVTPGIFGNNLKIENIMVDENLTAKISSYNLPMPAKVGSESPFNGVETPDRLDSAEHGEKDDIYQLGVILLELITGKPITSQSELEVQRAQLETGLRDSKLRGMADPSILGTFAYQSLKTTVEITINCLSRDPSQRPSIEDILWNLQYSVQVQEGWTTSSEILTQSYSFS* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00981 743 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 217 342 - -
Eupl04g00981 743 Gene3D Transferase(Phosphotransferase) domain 1 534 733 - -
Eupl04g00981 743 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 534 735 - -
Eupl04g00981 743 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 358 730 - -
Eupl04g00981 743 Gene3D Ribonuclease Inhibitor 29 214 IPR032675 -
Eupl04g00981 743 Pfam Leucine rich repeat 240 299 IPR001611 GO:0005515
Eupl04g00981 743 SUPERFAMILY Protein kinase-like (PK-like) 430 719 IPR011009 -
Eupl04g00981 743 ProSiteProfiles Protein kinase domain profile. 450 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00981 743 Gene3D Phosphorylase Kinase; domain 1 426 533 - -
Eupl04g00981 743 SUPERFAMILY RNI-like 105 329 - -
Eupl04g00981 743 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 215 - -
Eupl04g00981 743 Pfam Protein kinase domain 450 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00981 743 Gene3D Ribonuclease Inhibitor 215 345 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00981 Eupl-Chr4 15038888 15043252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00981 45 733 Miscellaneous Gene Families AT3G03770 43.087 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Eupl04g00981 Pkinase 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00981 - - nnu:104596990 929.858