Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00977 ATGGAGGGGACGTTGAAAAGATCTGCTCTTGTACTAAAAGAAGAGAAAAGGGTTGATTCTAATAGTGATGAAGAGTTTGGAGAGATTGGAGAGGTTGGAAATGGAAGGCAGGTCCATGAGGACTATAATTCGAAGCCATCTTCACTCACCCAGAAGGATTTGGGCATTAACAAGCAGGAGGATCAGCTTGAATCCGCCAAAGCGGCAATGGGTGAAGTGAGAGAAGAAAATGAAAGATTGAAGACGGTATTATCTCGAATTGTGAAGGATTACCAGTCTCTCCAGATGCACTTCTTTGACATCTTTCAACAAGAACAAGCTAAGAAGTCTACAGATACAACTCCTACCCATCAAGAAATTGAAGAACCTGATCAACTTGTTTCACTTAGCCTAGGAAGAAGTTCATCTGAGCCCAAAAAGGAAGAAAAAAACAATAACTCGAGCAAATCTAAGGAGGATGAGGAATTGAAAGAAGGATTAGCTCTTGGGTTGGACTGCAAATTTGAAGTATCTAAGCCGGGTCCAACGGAACCTGTTGTGAACCCTAGCCCAGAAAACAGCTTCAACGAACCTAAGGAAGATGAGGTTGGAGAGCAATGGCCACCCAATAAAATCCTTAAGACGACGAGAAGCGGAGATGATGAAGTTTCACAACAGGCCCATGTGAAAAAAGCTAGGGTTTCTGTGAGAGCAAGATGTGATACCCCAACGATGAACGACGGATGTCAATGGAGGAAATATGGTCAGAAAATCGCGAAAGGAAATCCTTGCCCTCGAGCATATTATCGATGCACAATTGCACCAGCATGCCCAGTAAGAAAGCAGGTGCAGAGATGTGCTGAGGACATGTCCATCTTGATCACCACCTATGAAGGAACCCACAACCACCCACTACCAATTTCAGCCACAGCTATGGCTTCCACCACCTCTGCAGCCGCTTGCATGCTAATGTCTGGCTCTTCAAGCTCCCGAACAGCCCTTGGGGGCTCGGCCACGACCACCACTGCTGCTGCCGATCTCCATGGACTAAACTTCAATTACACTGATAATTCAAGATCAAGGCAGTTCTACTTACCCAACTCTTCAATCTCATCTTCACCTTCTTACCCAACAATCACTCTTGACCTTACTGCACCCCCATCATCTTCATCCACAATGTCTCAATTCAACAGATTATCTTCCAACTTCCCTACAACACCAAGATACTCTTCAACAAGTTTCAACTTTTCTTCTTCTGAATCCAACACTACTAGTCTACCAACATCTTGGGGTAATGGATACCTAAGTTATGGGACTGCTCAGTCCCAAAACAAAAACCAAATGGGGTCTTTAAATCTTGGAAGACAAACCCAAGAACATTTCTATCAGCCTTACATGCAAAAGAACAACCCAAGTCCTCCTCAACAGTCTTTGACGGAAACCATTACCGCCGCCACCAAGGCCATAACATCAGACCCAAGTTTCCAATCAGCACTGGCAGCTGCGATAACATCAATCATGGGAAGTGGTGGGGCTGGGGCGCCCAATGGAAACAAAGGTAGCGGAGATAATTTTGGCCAGAATATGAAGTGGGGTGAGGCCTTTCCAGCCATTTCGACCTATTCATCGACCCCGAATGGAAATGGGTGTGCATCGAGCTACTTGAACAGATCGTCATCTTCAAATCCTCAACAAGGAAGCTTGATGTTTCTTCCACCTCCATTGCCATTTTCTACCACAAAGAGTGCTTCTGCGTCTCCTGTTGACAATAGGGACCATATCAACTGA 1767 0.4516 MEGTLKRSALVLKEEKRVDSNSDEEFGEIGEVGNGRQVHEDYNSKPSSLTQKDLGINKQEDQLESAKAAMGEVREENERLKTVLSRIVKDYQSLQMHFFDIFQQEQAKKSTDTTPTHQEIEEPDQLVSLSLGRSSSEPKKEEKNNNSSKSKEDEELKEGLALGLDCKFEVSKPGPTEPVVNPSPENSFNEPKEDEVGEQWPPNKILKTTRSGDDEVSQQAHVKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPISATAMASTTSAAACMLMSGSSSSRTALGGSATTTTAAADLHGLNFNYTDNSRSRQFYLPNSSISSSPSYPTITLDLTAPPSSSSTMSQFNRLSSNFPTTPRYSSTSFNFSSSESNTTSLPTSWGNGYLSYGTAQSQNKNQMGSLNLGRQTQEHFYQPYMQKNNPSPPQQSLTETITAATKAITSDPSFQSALAAAITSIMGSGGAGAPNGNKGSGDNFGQNMKWGEAFPAISTYSSTPNGNGCASSYLNRSSSSNPQQGSLMFLPPPLPFSTTKSASASPVDNRDHIN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00977 588 MobiDBLite consensus disorder prediction 34 73 - -
Eupl04g00977 588 Coils Coil 56 83 - -
Eupl04g00977 588 MobiDBLite consensus disorder prediction 57 73 - -
Eupl04g00977 588 Pfam WRKY DNA -binding domain 239 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g00977 588 MobiDBLite consensus disorder prediction 547 588 - -
Eupl04g00977 588 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 512 IPR044810 GO:0003700
Eupl04g00977 588 MobiDBLite consensus disorder prediction 547 561 - -
Eupl04g00977 588 SUPERFAMILY WRKY DNA-binding domain 231 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g00977 588 MobiDBLite consensus disorder prediction 107 156 - -
Eupl04g00977 588 FunFam probable WRKY transcription factor 31 223 300 - -
Eupl04g00977 588 MobiDBLite consensus disorder prediction 120 134 - -
Eupl04g00977 588 ProSiteProfiles WRKY domain profile. 233 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g00977 588 MobiDBLite consensus disorder prediction 171 216 - -
Eupl04g00977 588 Gene3D WRKY domain 223 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g00977 588 MobiDBLite consensus disorder prediction 40 56 - -
Eupl04g00977 588 SMART WRKY_cls 238 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g00977 588 MobiDBLite consensus disorder prediction 135 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00977 Eupl-Chr4 15001438 15005316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00977 70 504 WRKY Transcription Factor Family AT5G15130 47.134 1.20e-106 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl04g00977 WRKY 6.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00977 - - msin:131255908 723.005