Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00970 ATGTTCTCCATTTGTTCATCCCTTCGAATTCTAGTTCCTCAATGGAGAGGGAGAAAGACAAATTTTTGGATTTTCCTCCATTCAAATCGGAAAACTGGCTTCATTTCTTGTACAATTTCTTCTTCAATGAACGACGATTCGGTTTCGGTCCCAAAACAAAACCAGATTGATTATGATCCTTCGGAGGAGCTTTTCGGACTCGAAGTCGATCTAAAGCGAAGGAATGTAGTTTCTGGGGCACCCAAACCTAGGTCCTGGTTTGGTCCAAACGGCCAGTATATCAGAGAGCTACCTTGCCCCAGCTGTAGGGGTAGAGGTTATACACCATGTACAGAGTGCGGCATAGAAAGATCTAGGTTAGATTGTTCAGAGTGTAATGGAAAGGGTATAAGGACTTGCCGACAATGCTTGGGAGATTGTGTGATATGGGAAGAGTCAATTGATGAGCGACCATGGGAAAAAGCTCGCTCCATATCTCCACTCAAAGTCAAGGAAGATGATGAAGTAGACAATCTAGATATAAAGTTAAATGTTAGAAGAAAATCAAAGCGTGTATACCAGTCACCACCTCCTGAAGTTGGCTTAAAGATCAGCCGATCCCTAAGAAGTCTCAATGCAAAAACAGGATTATTTAGTAAACGAATGAAGATTCTCCATCGTGATCCTAAGCTTCATGCACAAAGAGTGGCTGCAATTAAGAAAGCTAAGGGGACTGCTGCAGCAAGGAAGCAAGCATCTGAAGCTTTGAAAGCTTTCTTCCGTGATCCAGAGAACCGTCGCAAGAGAAGCATTGCCATGAAAGGAGTGAAATTTTACTGTAGTAACTGTGGAAGGGAAGGACATAGGAGACACTACTGTCCAGAACTTATCAATGATAGCTCAATAGATAGACGGTTCCGATGTCAGTTATGTGGGGAAAGGGGACATAACCGAAGAACCTGTCACAAGTCAAGGTCAAGTGAACCCAAGAGAAGGTTACTGCGGCAACACCATTGTCAGATGTGTGGTCAAACTGACCATAATCGTAGGACGTGCCCTCGAGGGATGGAGGTAAAACCAAGTGTTGATTCAAAGAATGGCTTGCTGGCTTCTAATGGTAGGACTTACACATGTCGGTTATGTCAGGTTAAAGGGCACAATATTAGGACATGTCCTAGTAGAAAGACAGATTTGCTGGGAGATTAA 1185 0.4338 MFSICSSLRILVPQWRGRKTNFWIFLHSNRKTGFISCTISSSMNDDSVSVPKQNQIDYDPSEELFGLEVDLKRRNVVSGAPKPRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRLDCSECNGKGIRTCRQCLGDCVIWEESIDERPWEKARSISPLKVKEDDEVDNLDIKLNVRRKSKRVYQSPPPEVGLKISRSLRSLNAKTGLFSKRMKILHRDPKLHAQRVAAIKKAKGTAAARKQASEALKAFFRDPENRRKRSIAMKGVKFYCSNCGREGHRRHYCPELINDSSIDRRFRCQLCGERGHNRRTCHKSRSSEPKRRLLRQHHCQMCGQTDHNRRTCPRGMEVKPSVDSKNGLLASNGRTYTCRLCQVKGHNIRTCPSRKTDLLGD* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00970 394 ProSiteProfiles Zinc finger CCHC-type profile. 273 288 IPR001878 GO:0003676|GO:0008270
Eupl04g00970 394 SUPERFAMILY Retrovirus zinc finger-like domains 270 318 IPR036875 GO:0003676|GO:0008270
Eupl04g00970 394 SMART c2hcfinal6 370 386 IPR001878 GO:0003676|GO:0008270
Eupl04g00970 394 SMART c2hcfinal6 272 288 IPR001878 GO:0003676|GO:0008270
Eupl04g00970 394 SMART c2hcfinal6 300 316 IPR001878 GO:0003676|GO:0008270
Eupl04g00970 394 SMART c2hcfinal6 331 347 IPR001878 GO:0003676|GO:0008270
Eupl04g00970 394 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 321 387 - -
Eupl04g00970 394 Gene3D - 328 391 - -
Eupl04g00970 394 Gene3D - 270 327 - -
Eupl04g00970 394 Pfam Zinc knuckle 367 385 IPR025829 -
Eupl04g00970 394 SUPERFAMILY Retrovirus zinc finger-like domains 325 388 IPR036875 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00970 1 389 C2H2 Transcription Factor Family AT5G20220 63.591 7.02e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00970 - - nnu:104586744 627.861