Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00955 ATGGGTTTAGGTCCTGATGTTATTCAGGTGGAGGCATGGGATATGGGGAAATCGAAGAATAGGAAGAAGAAAGACGGCGCGTCAGCAGCGGAAACCGGGTGTTGGATTAAGTTTAGGTTTATAGGTAGTTGCATCTCTTCAAGATCCAAAGTGGATAGCTCTATAAGCGGCACCAGTACTAATTACGCGGAAAGTAAATCTACGAACGATACCAGCAGAGATCAGCCTGTTGCTCCAATAGTATCTTCTACAACAACGAGTAATGCAGAAAGTAACCCATCTACTCCCAAAGTAGATGAGGAACTGAAAGTTGCTTCTCAGCTTCGAAAATTCACATTTAATGAGCTTAAGTCCGCAACAAGGAATTTTAGACCAGAAAGTCTTCTTGGAGAGGGAGGGTTCGGTTGTGTTTTCAAGGGGTGGATTGAGGAGAACGGGACTGCTCCAGTGAAACCTGGCACAGGACTTACTGTTGCAGTTAAAACCCTCAACCACGATGGACTTCAGGGTCATAAAGAATGGATGGCTGAAGTTAATTTTCTCGGTGACCTCCTCCATCCTAATTTGGTTAAATTGATTGGTTACTGCATTGAAGATGATCAGAGGCTTCTAGTATATGAGTTTATGCCTCGAGGAAGCTTGGAGAACCATCTCTTTAGGAGGTCCCTGCCTCTTCCATGGGCCATCAGAATGAAAATTGCATTTGGTGCTGCAAAGGGCCTTGCTTTTCTTCACGAGGAAGCCGAAAGGCCAGTGATTTATCGCGATTTCAAAACATCTAACATCCTGTTAGATGCGGACTACAATGCCAAGCTCTCTGACTTCGGACTTGCCAAGGATGGTCCTGAGGGAGATAAGACTCATGTATCTACTAGAGTGATGGGAACTTATGGCTATGCAGCCCCTGAGTATGTGATGACAGGGCATCTGACATCAAGGAGCGATGTCTACAGTTTCGGGGTGGTCCTACTAGAGATGCTGACTGGGCGAAGATCCATGGACAAAAACCGACCAAATGGGGAGCACAACCTGGTGGAGTGGGCACGGCCACATCTCGGGGAGAGGCGACGGTTTTACCGGCTGATAGACCCTCGCCTTGAAGGTCACTTCTCAATCAAAGGCGCTCAGAAGGCTGCTCAGTTGGCTCACCACTGTCTTAGCCGGGACCCAAAAGCCAGACCTCTCATGAGCGAAGTTGTCGAAGTCCTCAAGCCTCTACTAAATCTTAAGGACATGGCCAGCTCCTCCTACTATTTCCAGACCATGCAAGCAGAGCGCACTGGGGCTAACTTCAACAACCCAAATGCTAGAAATGGCCTAAGAACACAGGCAGGATCCATATCAAGGAACGGGCAAGCAATGAGGAGCCTCTCAATCCCGAATGGTTCGCATGCTTCTCCATACCACCATCATCACCATCCATCACCAAAACTGAATGATAAGCAGCCATAG 1452 0.4766 MGLGPDVIQVEAWDMGKSKNRKKKDGASAAETGCWIKFRFIGSCISSRSKVDSSISGTSTNYAESKSTNDTSRDQPVAPIVSSTTTSNAESNPSTPKVDEELKVASQLRKFTFNELKSATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWMAEVNFLGDLLHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWAIRMKIAFGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAHHCLSRDPKARPLMSEVVEVLKPLLNLKDMASSSYYFQTMQAERTGANFNNPNARNGLRTQAGSISRNGQAMRSLSIPNGSHASPYHHHHHPSPKLNDKQP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00955 483 PANTHER OS01G0588500 PROTEIN-RELATED 82 406 - -
Eupl04g00955 483 CDD STKc_IRAK 129 406 - -
Eupl04g00955 483 SUPERFAMILY Protein kinase-like (PK-like) 101 403 IPR011009 -
Eupl04g00955 483 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Eupl04g00955 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Eupl04g00955 483 MobiDBLite consensus disorder prediction 50 99 - -
Eupl04g00955 483 Gene3D Transferase(Phosphotransferase) domain 1 209 426 - -
Eupl04g00955 483 FunFam Probable serine/threonine-protein kinase PBL8 209 424 - -
Eupl04g00955 483 MobiDBLite consensus disorder prediction 454 483 - -
Eupl04g00955 483 MobiDBLite consensus disorder prediction 50 95 - -
Eupl04g00955 483 Pfam Protein tyrosine and serine/threonine kinase 127 403 IPR001245 GO:0004672|GO:0006468
Eupl04g00955 483 Gene3D Phosphorylase Kinase; domain 1 103 208 - -
Eupl04g00955 483 FunFam Serine/threonine-protein kinase BIK1 90 208 - -
Eupl04g00955 483 ProSiteProfiles Protein kinase domain profile. 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00955 Eupl-Chr4 14718093 14731007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00955 84 403 Glycoside Hydrolase AT3G07070 54.054 3.04e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl04g00955 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00955 - - msin:131248802 850.892