Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00927 ATGACCGGAACACAGTTTGGATTGAAGCCCCCTGCAGTCCCGATGCCTAAAATGATACGACTTGCTAACGATGGATACAAGTGTCCGGCACCAAAGCGTCGTGGGAGTTCAATGAATGTATGTTGTGTCAGGGACCCGAAATTCAAGTCCAAAGACACAAAAACAACCAAATTCTTGCCTCGCCAAAATGGCGATCTTTCCTTCACTTATGATGTTCTCCAAGCCTTTGAAAGTAAGTATCTTGCTCAGGTAACTATCGATAACAACAACCCTCTCGGACGTCTTGATCACTGGAACTTGACTTGGGAGTGGATGAGAGGGGAGTTCATATACTCCATGAAAGGAGCCCACACTCTTAAAAAAGATTCTTCAAAATGCATTTATGGCAGTACCGCGAGCTTCTACAAGGATTTGGACTTCACTCCTGTTATGAACTGTCAAAGGAAACCAGTCATATCTGATCTCCCTCCAGATAGAGAGAAGGACAATAGCGTTGGAAATCTACCATACTGTTGTAGAAATGGCAGTCTCCTACCAACCACAATGAATGAGACCAAAGCAAGGGCCATCTTCCAATTGCAAGTCTTTAAGATTCCACCAGATATGAATCGAACGGCTCTTTACCCTCCCCAAAAATGGAAAATTAATGGAATTCTTAATCCAGACTATAAATGTGGGCCTCCGATTAGAGTAGACCCAACAGAATTTCCAGACACAAGTGGTCTTATGTCTACGACTTCAGCTATTGCAAGTTGGCAAGTGGTCTGCAACATTACCAGGCCGAAGAAGACGAATTCTCGCTGTTGTGTTTCCTTCTCAGCCTTCTACAACGACTCTGTCATCCCTTGCAATACCTGTGCTTGTGGTTGCGGTGACACTGACACTTGCAATCCCAATGCCTCGCCATTGCTTCTCCCTTCAGAAGCTCTTCTTGTTCCTTTTGCAAATAGAACAGCGAAAGCCAAAGCGTGGGCAAAAATAAAACACCGTCATGTTCCCAACCCATTACCTTGTGGTGATAACTGTGGGGTTAGCATCAATTGGCACATAAACTCTGACTATAGGAAAGGATGGACAGCTCGGATCACTCTCTTCAATTGGGAAGATTTCTATTTCGAAGATTGGTTCACAGCAATTCAAATGAACAAAGCTTATGCTGGTTATGAAAACGTGTACTCGTTCAACGGAACGAAGCTGCCACAACTCAATAACACCATCTTCTTCCAAGGCTTACCAGGTTTAACATTCTTGATGGGAGAAACAAATGGGACAAATCCACAACATGATCCGCATGTACCCGGTAAGCAACAATCAGTGATTTCATTTACGAAGAAAAGGACACTAGGCATAAGCATAGTACAGGGAGATGGGTTTCCTTCAAGAGTGATTTTCAATGGGGAAGAGCGCTCACTTCATACAGAAATCCCTAAGGGAGCTGGTCATCTATCTCATATCTCAAAACCAGAGGCTGGAGATGTTTCTATTCCTAGTGGTAACACAACTGGGTTGTTCTTTGAGAACTCTTACACCCCAACCACTACCACCACCAAGCAAGGGCAACAATAA 1566 0.4393 MTGTQFGLKPPAVPMPKMIRLANDGYKCPAPKRRGSSMNVCCVRDPKFKSKDTKTTKFLPRQNGDLSFTYDVLQAFESKYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIYSMKGAHTLKKDSSKCIYGSTASFYKDLDFTPVMNCQRKPVISDLPPDREKDNSVGNLPYCCRNGSLLPTTMNETKARAIFQLQVFKIPPDMNRTALYPPQKWKINGILNPDYKCGPPIRVDPTEFPDTSGLMSTTSAIASWQVVCNITRPKKTNSRCCVSFSAFYNDSVIPCNTCACGCGDTDTCNPNASPLLLPSEALLVPFANRTAKAKAWAKIKHRHVPNPLPCGDNCGVSINWHINSDYRKGWTARITLFNWEDFYFEDWFTAIQMNKAYAGYENVYSFNGTKLPQLNNTIFFQGLPGLTFLMGETNGTNPQHDPHVPGKQQSVISFTKKRTLGISIVQGDGFPSRVIFNGEERSLHTEIPKGAGHLSHISKPEAGDVSIPSGNTTGLFFENSYTPTTTTTKQGQQ* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00927 521 Pfam COBRA-like protein 80 259 IPR006918 GO:0010215|GO:0016020
Eupl04g00927 521 PANTHER COBRA-LIKE PROTEIN 7 1 482 - -
Eupl04g00927 521 MobiDBLite consensus disorder prediction 479 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00927 Eupl-Chr4 14277921 14283177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00927 1 486 COBRA Gene Family AT3G20580 66.258 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00927 - - nnu:104585657 788.104