Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00923 ATGAAAAATGCAACTCGTGCTGCTATGACTAGAAATCCCAATAGTGGAATAAATATCTCTGATCAACAGGCTAATCATCAGCCCCTAGGAAATTCAGCAACAATAGAAAGAGGATCAAATGACCCAAGAAATGATAAAGATGTCCCAACTACAACTTCCACAGAAAACTTGCCAAATGCCTCTATAGGTGGATCATCTCAACAATCCAAGAAAAGAGGACCTTCTAAATGTAAAACAGTCGCAACAGATTGCAACAAAAGGCTGGTGGTTACATTTAATGAGAGGGGCCAACCTATTGATGACGCATCTGTAAAAATGGTTTCTTTTTTGGGAACTTTGGTACGGGAGATGGTTGACATAACCGTTGATGATTGGAGGAGAGTTTCTATGGCAACAAAAGATAGGTTATGGGAAGCAATCAAGCAAAAATTTGTCCTGGAAGAGCATTCGAGGAATTTTATCATGAGGGAGTCAGGCTACCTATGGAGGAATTATAAATCGAGTTTGACTCAAATGGTAGATTCTTATGAGAATGAAGCTGATAAAATTGCCGCCAAGCCAAATAGGATTAACCTTGAACAATGGAAGACCTTTGTAAGAAAAAAAGCATCAAAAGAATCCAAAAAAAATATAAAAGATTTTAAAGAATTATCAACTTGGTCCTCTTCCTCATCTCTCAAAGACGATGCTCTCTCACATGTGTTTGGAGCTGAACGACGTGGTCGAGTTCGAGGAGTTGGATTTGGAGTAACTCCATCTATCTTAGGTGTCATGTCACAAAGTCAAGGAAAGGTAGCCCAACTAGAACAACAAGTGAGTGAGCTAATGCAAGAACAGAGGAAATCTATGCAAAATTTAATCAATCTAATGCTAACTCAGGCAAGTAATAAATGTAGAAAGTTAATTAGTTATGAAATTGTGCTACCAGACAGAGCTCTCTATTTGATACCCATCGAGGATGCTGAGTTCAAAGATGGCAAGATTGAATGGACCATCATGACTATTTCTAAAGATCGTGTGAAGCCATCTCCAAAGCCAGACAGTTGGAAGCTTAATGAGATCTTTGCAATGGGCGTCGTAATAAGGACTTATCTTGCATTAGTTACTGTCTTATTTTACTGGGCTGTGGGAAGCACCACTTTCTTTGAGGCTCATTTCCATGTGAGGTCCCTAAGCAGCAGCAGTGAGGAGATCTCATTTGCTATATATCTGCAAGTCAGCATCATTAGCCAGGCTCTCATATTTGTTACGCGCAGTCAAAGTTGGTCATTTATGGAGAGGCCCGGGACTCTTCTGATGTGTGCATTTGTGGTCGCTCAACTGGCATTGCTGTTGATGTTCTTGATATAA 1350 0.3993 MKNATRAAMTRNPNSGINISDQQANHQPLGNSATIERGSNDPRNDKDVPTTTSTENLPNASIGGSSQQSKKRGPSKCKTVATDCNKRLVVTFNERGQPIDDASVKMVSFLGTLVREMVDITVDDWRRVSMATKDRLWEAIKQKFVLEEHSRNFIMRESGYLWRNYKSSLTQMVDSYENEADKIAAKPNRINLEQWKTFVRKKASKESKKNIKDFKELSTWSSSSSLKDDALSHVFGAERRGRVRGVGFGVTPSILGVMSQSQGKVAQLEQQVSELMQEQRKSMQNLINLMLTQASNKCRKLISYEIVLPDRALYLIPIEDAEFKDGKIEWTIMTISKDRVKPSPKPDSWKLNEIFAMGVVIRTYLALVTVLFYWAVGSTTFFEAHFHVRSLSSSSEEISFAIYLQVSIISQALIFVTRSQSWSFMERPGTLLMCAFVVAQLALLLMFLI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00923 449 Coils Coil 166 186 - -
Eupl04g00923 449 MobiDBLite consensus disorder prediction 45 75 - -
Eupl04g00923 449 MobiDBLite consensus disorder prediction 1 38 - -
Eupl04g00923 449 Gene3D - 283 449 - -
Eupl04g00923 449 PANTHER CALCIUM-TRANSPORTING ATPASE 331 447 - -
Eupl04g00923 449 Coils Coil 258 285 - -
Eupl04g00923 449 MobiDBLite consensus disorder prediction 1 78 - -
Eupl04g00923 449 SUPERFAMILY Calcium ATPase, transmembrane domain M 333 447 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00923 Eupl-Chr4 14236204 14244704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00923 331 446 Primary Pumps ATPases AT1G17260 74.138 9.29e-52 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00923 K01535 - ming:122091092 191.815