Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00921 ATGGCAAACACCATTTTAAGGTCATATGATCATAACAGGAGATTTCATGTGTTGGGGTTCTTTAGTTTTCTTCTGTTGATTCAAAGAGTTGATGCAACTGAGTACAAGGTTGGAGGCTCAAAGGGTTGGACTGTGCCCACTGAATCCAATGCACTCATCTACAATCAATGGGCAGAGATGAAACGGTTTCAAACTGGAGACTCTCTATTGTTCGTCTACCAGCCAGACAAAGATTCAGTAGTTCAAGTAAACAAGGAGGAGTACACCAACTGCACCACAGAAATACCCATTGCAACTTTCAGCGACGGCAACACTTTATTTAAGTTCAATCAATCTGGTCCTTACTACTTCATTAGTGGGATTAGAGAAAACTGTCTCAAGAATGAGAAGATGATTGTTTTAGTCATGGCAGATAGAAGCAACAAATCGTCAAACTCAAAGCAGACTAGCTTGGTGTCCCCTCCTTCTCTACCACCTTCGGGCTCCATTGAGATCATCCCATCTGCAGCTCCTGTTGGTGAGGAATCTCCTTCTCCTCCGCCTTCAGTTTCCACGGAGCTCATCCCATCTGCAGCTCCTGTTATGTTCTTCCTTCTCTCAATGACACCCATCATCCCATTCTTTGCTTCCATTTCCACCAACGGTATCATAGTTCACACAATCATGTCAGATAAGATTACAACTACACCGTGCCAAAAGATTCCCAGGGATTTGACAGAGGCATCATTATCAGGTGCAGGGTTATCCATTGTAGGAGCCTTGTCCATGATGTTTTTATTTGGAATGGAATTAATTGATTATCTGACAGTGAGCACGTCTACATCCATTGTTGTTGATAAGAGTTCGGATGGGGATTTCTTACGCATTGAATTTAATATCAGTTTTCCAGCACTATCGTGTGAATTTGCCTCGGTTGACGTGAGTGACGTGTTGGGAACAAACAGGTTAAATATAACGAAAACAATCCGTAAGTTTTCAATAGATGCCAATTTAAAGCCAACTGGTTCTGAGTTTCACCCAGGACCAATTCCAAATGTTATTAACCATGGAGACGAAGTTGACGAAGAATACGGCGAAGGCTCGGTTTCACTAACTGCTAATAATTTTGACAAATATGCACACCAGTAA 1128 0.4202 MANTILRSYDHNRRFHVLGFFSFLLLIQRVDATEYKVGGSKGWTVPTESNALIYNQWAEMKRFQTGDSLLFVYQPDKDSVVQVNKEEYTNCTTEIPIATFSDGNTLFKFNQSGPYYFISGIRENCLKNEKMIVLVMADRSNKSSNSKQTSLVSPPSLPPSGSIEIIPSAAPVGEESPSPPPSVSTELIPSAAPVMFFLLSMTPIIPFFASISTNGIIVHTIMSDKITTTPCQKIPRDLTEASLSGAGLSIVGALSMMFLFGMELIDYLTVSTSTSIVVDKSSDGDFLRIEFNISFPALSCEFASVDVSDVLGTNRLNITKTIRKFSIDANLKPTGSEFHPGPIPNVINHGDEVDEEYGEGSVSLTANNFDKYAHQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00921 375 Pfam Plastocyanin-like domain 43 127 IPR003245 GO:0009055
Eupl04g00921 375 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 232 358 IPR045888 -
Eupl04g00921 375 SUPERFAMILY Cupredoxins 32 136 IPR008972 -
Eupl04g00921 375 CDD OsENODL1_like 33 136 IPR041846 -
Eupl04g00921 375 ProSiteProfiles Phytocyanin domain profile. 33 137 IPR003245 GO:0009055
Eupl04g00921 375 Gene3D - 32 149 IPR008972 -
Eupl04g00921 375 FunFam Early nodulin-like protein 1 32 140 - -
Eupl04g00921 375 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 232 315 IPR039542 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00921 Eupl-Chr4 14221588 14229056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00921 18 175 Phytocyanin Superfamily AT3G20570 50.303 1.29e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00921 - - pda:120112415 248.44