Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00915 ATGGGCCTTGATTACTACAATATATTGAAGGTGAGCAGAAATGCAAGTGAGGAGGACCTAAAGAAGGCGTACAGGAGACTCGCCATGAGATGGCATCCTGACAAGAACCCTACCAACAAGAAAGAGACCGAAGCCAAGTTCAAGCAGATCTCCGAGGCCTACGATGTCCTCAGCGACCCTCAGAAGCGTCAGATCTATGATCTCTTCGGCGAAGATGCCCTCAAGTCCGGTCAGGCCCCACCACCTCCCTCCTACGCTGCTGCCGCTGCCCATCCCAATCAGTCATTCCGGTTCAGTCCGAGGGATGCTGATGACATCTTTGCTGAGTTCTTTGGAGGATCCGACGGTGGTGCTGGTGGTCGTAGTCGTGTTTTTGAGGATAGGTTCTTTAGAAATTCTAATGGTGGTGTTGCTCACCAGACTCCTCGGAAAGCCCCGGCTCTCGAGAATAAGTTGCCGTGCCGTCTGGAGGAGCTTTATTCCGGTTCAAGAAAGAAAATGAAGATTTCGAGGAATGTTTCCGATTCTTCCGGTAAGCCAAGGACTGTGGAGGAGATCTTGACCATCGATATCAAGCCCGGTTGGAAGAAGGGCACAAAGATCACTTTCCCTGAGAAGGGCAACCAAGAGACTGGTGTCATTCCAGGAGACCTAGTTTTCGTGATAGATGAGAAACCTCATGGAGTATACAAGAGGGATGGGAATGATCTGGTGATCAACCAAAGGATATCACTACTGGATGCTCTCACAGGAAAGACCCTCAACCTGACAACTGTGGATGGAAGGAATCTGATGATCCCCATAACAGATATTGTTAGACCAGGCTACGAGATGGTGGTGCCAAATGAAGGAATGCCGATCTCAAAGGAAACTGGGAAGAAAGGGAACCTGAGAATCAAGTTCGATGTCAAATTCCCATCAAGGCTCACTGCAGAACAGAAATCTGGTGTGAGAAGGGTGTTGGGAGGAGGCTGA 975 0.4954 MGLDYYNILKVSRNASEEDLKKAYRRLAMRWHPDKNPTNKKETEAKFKQISEAYDVLSDPQKRQIYDLFGEDALKSGQAPPPPSYAAAAAHPNQSFRFSPRDADDIFAEFFGGSDGGAGGRSRVFEDRFFRNSNGGVAHQTPRKAPALENKLPCRLEELYSGSRKKMKISRNVSDSSGKPRTVEEILTIDIKPGWKKGTKITFPEKGNQETGVIPGDLVFVIDEKPHGVYKRDGNDLVINQRISLLDALTGKTLNLTTVDGRNLMIPITDIVRPGYEMVVPNEGMPISKETGKKGNLRIKFDVKFPSRLTAEQKSGVRRVLGGG* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00915 324 Gene3D - 147 225 - -
Eupl04g00915 324 Gene3D DnaJ domain 3 123 IPR036869 -
Eupl04g00915 324 Pfam DnaJ domain 4 67 IPR001623 -
Eupl04g00915 324 CDD DnaJ 4 59 IPR001623 -
Eupl04g00915 324 PRINTS DnaJ domain signature 62 81 IPR001623 -
Eupl04g00915 324 PRINTS DnaJ domain signature 24 39 IPR001623 -
Eupl04g00915 324 PRINTS DnaJ domain signature 6 24 IPR001623 -
Eupl04g00915 324 PRINTS DnaJ domain signature 42 62 IPR001623 -
Eupl04g00915 324 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Eupl04g00915 324 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Eupl04g00915 324 FunFam DnaJ subfamily B member 13 3 121 - -
Eupl04g00915 324 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 321 - -
Eupl04g00915 324 SUPERFAMILY HSP40/DnaJ peptide-binding domain 230 315 IPR008971 GO:0006457|GO:0051082
Eupl04g00915 324 FunFam DNAJ heat shock family protein 226 321 - -
Eupl04g00915 324 FunFam Dnaj homolog subfamily b member 144 225 - -
Eupl04g00915 324 CDD DnaJ_C 148 309 - -
Eupl04g00915 324 SMART dnaj_3 3 62 IPR001623 -
Eupl04g00915 324 SUPERFAMILY HSP40/DnaJ peptide-binding domain 148 227 IPR008971 GO:0006457|GO:0051082
Eupl04g00915 324 Gene3D - 227 307 - -
Eupl04g00915 324 Pfam DnaJ C terminal domain 149 306 IPR002939 -
Eupl04g00915 324 SUPERFAMILY Chaperone J-domain 4 119 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00915 Eupl-Chr4 14013860 14022781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00915 5 67 C2H2 Transcription Factor Family AT1G74250 38.806 2.13e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00915 K09510 - aew:130750292 472.241