Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00911 ATGGGGCATAAGAAGCGAAACCCTGCTCCACGCTCCAGACCATCTCCTCCTCCTCCTTCTGATGCTGCTGCTGCTGCTGCTGCAGCGGTGGTCCCTACCGATGCAGCCGATGGTCTTGGCCCCGTCGAAGATGAGCCTTCGCGTTCGCTGAATCTCGGTTCTTCCGATGATTCCCTTCGCGAACAAAGTAAGATCGAAGCCGCTGTCCAGTCGGACCCTTCGTCTCACTCTTCGATCAAGCTCGAATGCGAGCGGTCCCTCACCGCTCTGCGGCGTGGGAACCACACCAAGGCCCTAAGACTCATGAAGGAGTCGTGTCTCCGCCACGAGACATCCGCTCTCCTCCACCGCGTCCAAGGGACTGTCTGTGTCAAGGTTGCTTCCCTAATCGAAGACCCTAATGCCAAACAAAGACACCTTAAGAACGCAATTGAGTCTGCAAGGAGAGCGGTTTCGCTCTCCCCCAACTCAATCGAGTTTGCTTATTTCTATGCTAATCTACTCCACGAGGCGTCAAATGATAGTAAGGGGTACGAGGAGGTTGTGCAAGAGTGTGAGAGGGCACTCTCGATTCAGAACCCAGTTGACCCGGCGAAAGAGAGCTTGCAGGATGAGAGTCAACTGAAGTTGTCGACGCCGGACGCACGGATCGCCCATGTGCAGCAGGAGCTTCGTTCGCTTATTCATAAATCCAACATTGCCTCAATCTCGACTTGGATGAAAAATCTTGGAAATGGAACTGGTGAGGAGAAGTTTCGGTGGATACGGATGAGACCGCTATCTGAAGACCCAATGGAAGTTAAGACTAGGCGGCCTAATGAGATCAAGAAGGCCACTAAGACACCAGAAGAGAGGAGAAAAGAGATTGAGGTGCGTGTTGCCGCTGCGAGGCTGTTGCAGCAGAAATCTGATTCGCCCCACTCGCAGACTGACGAGGATAGGACATCTGACTCGTCCTCGGGGGCCCACCGACTGGGAGAGCGTCGTAAGTATGCAAATTTACGCAAGATTGCCTCTTCCGCAGAAAGGATGGTTCAGGTTCGGTCGTATTGGAACTCCATGAGTCTTGATAAGAAGCATAGCTTGCTTGAAGTGAGAGTTCCTGATCTCAGGGCCCATTTCAGTTCATCCAAGGATGGTTTGGCAACGGAGGTTCTATCAGAAGCTCTATCTTTTGCTGAGGCCAATAAGACATGGAAGTTCTGGGAGTGCTGCCACTGCAATGAGAAATTTACTGATTGTGAATCGCATATGCAGCATGTTGTGCGGGAGCACATGGGGAACCTCTCGCCCAAGTTGCAGTCTGTCTTGCCTCAAGAAGTTGACAGTGAATGGGTTGAGATGCTTCTTAATGGTTCATGGAAACCTCTGGATGCCTCTGCTGCTGTAAAAATGCTTGAAGATCAGTCGAAATGCCAATCTCTGACAAATGTTGATGGTTCAAATATCGGGAACCATACTGACAGGAGTAAGGAGGACTGTCTTACTGACGGCTGGTGCTCTAAAGATACATGGGATTCTTCCGCGGACGAGGGAAAGGTACAGCCATTTGATGAAGAGTCCAAAGCGGAGGAGATTTGCAATGGAAGTTTTGTAGAAAGCAGAAACCATGATGATGTATCCAATTTTGAATTAATGGAATATGATAGCAACCGTTGGTCTAAGGATTATTCCTTTGCATGGAGTTGGCCGTTATCCGATGATTCTGAACGTGCAAAGCTCCTTGAAGGAATCCATGGCATGTTCCAGTTGCTTCTGAGACATAAGTATCTTGCTGCGAGCCAACTTAGCAAGGTGATACAATACACCATGGATGAGCTCCAAGGTCTCGCTCCTGGTTCATGGTTTATGAATCATGGTTTGGACCAAACGCCTCTCTGCATCTGCTTCTTGGGAGCTTCGCAGCTTAGAAAAGTCCTCAAATTCTTGCAGGAGCTTTCTCATTCTTGTGGGTTAGGCAGATATTCTGAGAAGAGTAGCACCACGGATGAGACACAAAGTGCCAGTCACGTTTTTGAAATCAGAGAGAGGTTATTTTTAACTGGTGATTCTACGTGTCTCCTTTTGGATGAACGTTTATTGCGGGGGGAAATTACTCCTGGAAGATATTCTGAGATGAGTAGCTCCGTGGATGATGGTGCTGCAGCAACTTCTGTTTTTGTTGGTGATTGTGAAGATGGGGTATCACCTGATAGCGATGCTTTGTTATCCTGGATATTTACAGGTCCTTTGAGTGGGGAACAACTGGCACCATGGATACATCTGCGAGAAGAGAAAACACATCGTGGAATGGAAATTCTCCAGATGCTTGAGAAGGAATTTTGCCTCTTACAGAGCTTGTGCGAGAGGAAATGTGAACATTTGAGCTACGAAGAAGCTTTGCAGGCGGTGGAAAGTGTCTGTCTTGAAGAACTTAAGAAAAGGGAGCACGTCACGAAATGCATCTCTCGAAGTTACGAGACTGTCCTCCTCAAGCGGCAGGAAGAGCTTGTTGAGAGGGACAATGATGTGCCGTTCATGAGCAGTCGGTTCGAGTTGGATGCTATATCAAATGTTCTTAAAGAAGCTCAAGCTTTGAATGTTACACAGTTTGGGTATGAGGAAACTTTGACTGGTGTATCTTCTCGTTTATGTGACTTGGAATGTGGTGAAGAGGATGATTGGAGGATGCAGGACTACGTGCATCAAGCAGATACTTGCATAGAAGTGGCGATCCAGAGACAGAAGGAGCAGTTATCTGTAGAGCTTAGCAAAATTGATGCAAGGATCATGCGGAATGTCACAGGCATGCAGCATTTGGAGCTTAAGCTTGGACCCTTTTCTGCCCATGATTACCGGGCAATTATGTTGTCTCTTGTTAAGTCATTCATGCGGGCACACTTGGAGGATCTTGTGGACAAAGATGCCACAGAGAAATCTGATGCTGCAAGAGAAGCGTTTTTAGCAGAACTTGCACTTGATGCCAGAAAGAGTATCAATAAAGGAGGTGATCAATCAAAACAAATGCAGGAGAAGTCAAAGGATAAGAAAAGGAACAAGGATAACAGAAAAGCTAAGGATTTAAAGGCTACTGGTGGTAATGATCAGCTTCTCCTTCATCAGGAAACCGCAGAACAGGCTTGCTTTCCCATTGCATCTGATCTAGATTCCGAGACTCTAGGTATTGCAAGCGTTGAAGAATTTAAACAAGAAGAGGAATTTAGACGTAAAATTGAGCTGGAAGCGGAGGAAAGAAAGCTTGAAGAAACTTTGGAATATCAAAGGCGAATTGAGGATGAGGCCAAACAGAAGCTCCTTGCAGAGCAACATAAGAAGGCTACTGGAACAATTCAAGAGAATGTGGCAGCCGGATTGTCTGTTGTTGACCTCAAGCCCAATGCTGATGATCCAGATGTACATGAGCAGTTGAGACATTATAAGCCAGTAAGCATTCCTGGTGATGGTGGCTCTTCAGTTAGTTGTAAAGGGATCGAACTTGGTGGTTCACATTCTCAAGTTCCCTTTCCCCCAGATGGTCGGAATATTGGATTGGATGAGTCCAGCAACTATTCTGGGAGGCATGACATGATGCTAAAATCAGACGCTGAGAGTGTCTCGTTTAGCTACCGTGAGAAGCCTCATGAATCTTATAGTTATGAGGATCCATCGACAGGGAAGACTGGATTGTTGAAAGATTTAGTTGTCAAACCCATAAACAGTGCAGGAGGAACTGCAGTGACAAGCAAATCCTTTCCCAATTCCAGCGTCCAAAGGAATAAAAGAACAAATAGTCAATCTCATGGCAAAGTCAAGCAAGGCCTACCTAACCGAGGAACTCCAGAAGATGGTGTTTTGCCTTCTGATCGATGGACTGGGAGGCAAGGCAAACGTCAGAACAGCTCTACCAAATTGCGTGACAGAAATCCTCAACCCCTATCCGCTGATAAAGAAAACCATGCAGTTAGTTTGCAAACTGAGAGTTGCACCAAAGAGCAAGCTAATGCAAGGGGTCAAGAGACCCTTCATGGTAGCAACATTGTTTTATATTCGGGAGACAATGAAACAAAGACATTGAGACAACTGCATGTAGAGGAAGATGATGAGGAAAGGTTCCAAGCTGACCTTAAAACAGCCGTGCGTCAAAGCCTTGACACATATCAAGCGCATCAAAATTTGCCCGTGGTTCCAGGGCCAAGAGTGCCTCCAAAGATATCTCCCGAAGCAGATGATTCTGGGGCTGCACAAAGTGAAGTCATGGTTAACAGTGTGAACAAAATGAATGTGTTTGGGACAGGGCTAAAAAATGAAGTTGGTGAATACAATTGCTTTCTGAATGTAATAATACAGTCTTTATGGCATATAAGACGTTTCCGAGATGAATTCCTGAAGAAGTCGTCATTGCATGTGCATGTCGGGGATCCTTGTGTTGTCTGTGCGTTAAAAGATATTTTTACTGCCTTGAGTATGGCGTCTGCAGACACACGAAGAGAAGCTGTTGCTCCTACTGGTCTGAGGATTGCTCTAAGCAACCTGTATCCTCATAGTAATTTCTTCCAGGAGGCGCAGATGAATGATGCTTCTGAAGTATTGGTAGTCATCTTTGAGTGTCTTCATCGCTCATGTACTTCTGGTTCGGGTGTTTCGGATACTGAATCAGAAGAAAGTAATTGCCCGGGCTCTTGGGAATGTGCAAACAATGCTTGCATAGCACATACTCTTTTTGGAATGAACATCTTTGAACAGATGAACTGCTACAGCTGTAGTGTGGAGTCCAGACATTTTAAATACACTTCGTTTTTTCACAACATCAACGCCAGCGCGCTCCGGACAATGAAGATTGAGTGTAAATATAGCTCTTTTGACGAGCTTTTGAAGTCTGTAGAGAGGAATCACCAGTTAGCCTGTGACCCTGATCCAGAGGTAGGGGGCTGTGGCGAACTCAACTATATCCATCATTTTCTTTCAACTCCTCCTCACGTGTTCACAACAGTTCTGGGTTGGCAGAATACCTGTGAGAGTGCAGATGACATATCGGCAACATTGGATGCCATAACCACCGAGTTAGATATTGGTGTGCTGTATCGAGGTCTAGATCCAGGGAACAGACATTGCCTGGTTTCAGTGGTTTGTTATTATGGGCAACATTATCACTGCTTTGCCTACAGCCATGAGCATGGACGATGGATCATGTATGATGACAGAACTGTCAAGGTAATTGGTGGCTGGGACGACGTTCTAACCATGTGTAAAAGAGGGCATCTACAGCCTCAGGTTCTTTTCTTTGAAGCTATAAATTAG 5277 0.4618 MGHKKRNPAPRSRPSPPPPSDAAAAAAAAVVPTDAADGLGPVEDEPSRSLNLGSSDDSLREQSKIEAAVQSDPSSHSSIKLECERSLTALRRGNHTKALRLMKESCLRHETSALLHRVQGTVCVKVASLIEDPNAKQRHLKNAIESARRAVSLSPNSIEFAYFYANLLHEASNDSKGYEEVVQECERALSIQNPVDPAKESLQDESQLKLSTPDARIAHVQQELRSLIHKSNIASISTWMKNLGNGTGEEKFRWIRMRPLSEDPMEVKTRRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSDSPHSQTDEDRTSDSSSGAHRLGERRKYANLRKIASSAERMVQVRSYWNSMSLDKKHSLLEVRVPDLRAHFSSSKDGLATEVLSEALSFAEANKTWKFWECCHCNEKFTDCESHMQHVVREHMGNLSPKLQSVLPQEVDSEWVEMLLNGSWKPLDASAAVKMLEDQSKCQSLTNVDGSNIGNHTDRSKEDCLTDGWCSKDTWDSSADEGKVQPFDEESKAEEICNGSFVESRNHDDVSNFELMEYDSNRWSKDYSFAWSWPLSDDSERAKLLEGIHGMFQLLLRHKYLAASQLSKVIQYTMDELQGLAPGSWFMNHGLDQTPLCICFLGASQLRKVLKFLQELSHSCGLGRYSEKSSTTDETQSASHVFEIRERLFLTGDSTCLLLDERLLRGEITPGRYSEMSSSVDDGAAATSVFVGDCEDGVSPDSDALLSWIFTGPLSGEQLAPWIHLREEKTHRGMEILQMLEKEFCLLQSLCERKCEHLSYEEALQAVESVCLEELKKREHVTKCISRSYETVLLKRQEELVERDNDVPFMSSRFELDAISNVLKEAQALNVTQFGYEETLTGVSSRLCDLECGEEDDWRMQDYVHQADTCIEVAIQRQKEQLSVELSKIDARIMRNVTGMQHLELKLGPFSAHDYRAIMLSLVKSFMRAHLEDLVDKDATEKSDAAREAFLAELALDARKSINKGGDQSKQMQEKSKDKKRNKDNRKAKDLKATGGNDQLLLHQETAEQACFPIASDLDSETLGIASVEEFKQEEEFRRKIELEAEERKLEETLEYQRRIEDEAKQKLLAEQHKKATGTIQENVAAGLSVVDLKPNADDPDVHEQLRHYKPVSIPGDGGSSVSCKGIELGGSHSQVPFPPDGRNIGLDESSNYSGRHDMMLKSDAESVSFSYREKPHESYSYEDPSTGKTGLLKDLVVKPINSAGGTAVTSKSFPNSSVQRNKRTNSQSHGKVKQGLPNRGTPEDGVLPSDRWTGRQGKRQNSSTKLRDRNPQPLSADKENHAVSLQTESCTKEQANARGQETLHGSNIVLYSGDNETKTLRQLHVEEDDEERFQADLKTAVRQSLDTYQAHQNLPVVPGPRVPPKISPEADDSGAAQSEVMVNSVNKMNVFGTGLKNEVGEYNCFLNVIIQSLWHIRRFRDEFLKKSSLHVHVGDPCVVCALKDIFTALSMASADTRREAVAPTGLRIALSNLYPHSNFFQEAQMNDASEVLVVIFECLHRSCTSGSGVSDTESEESNCPGSWECANNACIAHTLFGMNIFEQMNCYSCSVESRHFKYTSFFHNINASALRTMKIECKYSSFDELLKSVERNHQLACDPDPEVGGCGELNYIHHFLSTPPHVFTTVLGWQNTCESADDISATLDAITTELDIGVLYRGLDPGNRHCLVSVVCYYGQHYHCFAYSHEHGRWIMYDDRTVKVIGGWDDVLTMCKRGHLQPQVLFFEAIN* 1759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 263 287 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 1292 1306 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 1 79 - -
Eupl04g00911 1758 Pfam Protein of unknown function (DUF629) 346 903 IPR006865 -
Eupl04g00911 1758 ProSitePatterns Zinc finger C2H2 type domain signature. 404 425 IPR013087 -
Eupl04g00911 1758 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1424 1757 IPR028889 -
Eupl04g00911 1758 Gene3D Cysteine proteinases 1407 1756 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 1000 1023 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 299 327 - -
Eupl04g00911 1758 Coils Coil 1063 1093 - -
Eupl04g00911 1758 Pfam Ubiquitin carboxyl-terminal hydrolase 1425 1747 IPR001394 GO:0004843|GO:0016579
Eupl04g00911 1758 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1756 - -
Eupl04g00911 1758 Coils Coil 168 188 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 1235 1338 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 1308 1338 - -
Eupl04g00911 1758 SUPERFAMILY Cysteine proteinases 1424 1755 IPR038765 -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 1235 1265 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 48 79 - -
Eupl04g00911 1758 CDD Peptidase_C19 1514 1755 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 992 1026 - -
Eupl04g00911 1758 Gene3D Tetratricopeptide repeat domain 57 224 IPR011990 GO:0005515
Eupl04g00911 1758 Pfam Protein of unknown function (DUF627) 87 192 IPR006866 -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 306 327 - -
Eupl04g00911 1758 MobiDBLite consensus disorder prediction 1156 1181 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00911 1267 1755 C2H2 Transcription Factor Family AT3G47890 60.772 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00911 - - nnu:104608045 2551.93