Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00909 ATGGAAGGCAAAGCAAGGTTAAGATTTTCACACCCTGGTCTCTCACTGCTACCCTTTCGAGTTTTGTCTTCACCCACCCACGTGACCCTCTCTACGAACCACGAGACGCTCTTCCTCACTCTCACTCTCACTCTCACTCTCACTCGATCAAGTAGAGTAAAGAAGATCACAGATATCAGATCATTCTCTCTGTTTCTCTCCCCGTTAATGACTCCGCCGCCGCTACACACGATCACCCTCTTGCTCGTCGTCGTCGTTTTGACACTGTTCGTTGATCTGACGACCTCTCACACATGTTCTTCGCACCAAGCAGACAAATCTTCTTCATGTCCGCCGTTCATCTCTCCGCCTTCGTTCCCATTCGCTTCATCCCCCGGTTGCGGCCACCCATACTTTCAGATCCGGTGCTCCTCGCCGCACTCAATCATCTTTATCAACGACCTCTCGTTCTCTGTCCTCCGTCATGAACCAAACTCTAGTTCTCTTTTTCTCTTCCCTGACCCTGAGCCTTCCGTCCCCCACCCTACTCACTCTCAGTGTTCTGCTGCTTCTTTGCCCTCTCTTCCCAAACGCTCTATCAACCTCTCGGGCTCCCCATTTCGATTCTCTGACGTTTCATGCTCTAGGCTCTCTGTTCTCAGACCTTGCCCACCTCTCAATCTCCCAAATTGCAGTCTTTGTAGTTGGGATTGTGAGCTGCTTAAGCTCCCAGTTCGTCTCTTACAAGGCTGCGAACCCAAGCATCACTCGGTCTCTGAACAGGGCTGCCAAGAAGACGTCTTGGATTATTTAAACAGATTCCTGAAATGGGGAATTCAGGTTGAGTGGGATGAAGATCGCGACACCTACTTCTCGAATTGCAGCGCTTGCCATGCCAAGAATGGCGTTTGTGGCTACAATTCATCAGACCCCCAGAAACCTTTTATCTGCTTTTCCTCGCAGACCCAGCTTTCCTCGCCAATGCCGCCATGGATCCGTCGAGATAACCCAAATCGGATTGTTCTCTTGTGTACCATTTTCATCTTTACGTGCCTCTTGCTTGTTCTCGCAGTCGCAACGGCGATCTTTCGAAGCAGAGGCTTGAAATCATCGGCAACTGAAGAAGACCCAACTACTCTGTTCCTCCATCGCCATCGCTCAGCCAATCTCCTCCCACCCGTCTTCACCTACGAAGAGCTCGAGACATCTACAAATCGGTTCGACCCAAAACGCAAAATCGGCGACGGTGGGTTCGGTTCGGTTTACCTAGGCCAGCTCTACGACGGACGGATCGTTGCCGTGAAAAAGCTCCACAGACCACACACCGCGGCCGCTGCAACGGGTCGGGCCGCTTCCACGAAGTCGTTCTGTAACGAAATCTTAATACTCTCCTCGATCGATCATCCGAACCTCGTTAAGCTTCATGGGTACTGTAGCGACCCAAGAGGGCTCCTCCTCGTGTACGATTACGTTCCTAACGGAACCCTCGCCGACCATCTCCATGGGCCGAAGAGCTTATACAGAAAAGGGGCTTTAACATGGCAGGTAAGAGTCGACGCTGCGTTGCAGACGGCCATGGCGATCGAGTATCTACACTTCTCAGTCCAGCCAGCTATCGTTCACAGAGATATAACCTCATCGAACATCTTTGTTGAGAAAGATATGAGGATCAAGGTCGGAGATTTCGGGCTCTCGAGACTTCTCGTTTACCCTGAATCATCGTCGTCGTCGTCTGGACATGTGTGGACGGGACCGCAAGGTACTCCCGGGTACTTAGATCCGGACTACCACCGGTCCTTCCGACTGACGGAAAAGAGCGACTTGTACAGCTTCGGAGTCGTTTTGTTCGAACTGATATCGGGGATGAAAGCGGTGGACCTCAGTAGGGACAAAAGAGAGGTTGCGTTGGCCGATCTGGTGGTGTCGAAAATTCAGGTGGGTTCGCTGCACCAGGTGGTGGACCCGGTTTTGATACTTGAAGGGGAGGCGATGGGCACCATTAATGCGGTGGCGGAGCTGGCATTCAGGTGCGTGGCCGCCGATAAGGATGACCGTCCGGATGCTAAGGAGGTTGTAGCCGAGTTGAAACGGATTCGAAACCGTACACGTGTACATCGCGCTTCGAGTGTTGCTCCCGATGTCCCCAAAGCTTGA 2133 0.5223 MEGKARLRFSHPGLSLLPFRVLSSPTHVTLSTNHETLFLTLTLTLTLTRSSRVKKITDIRSFSLFLSPLMTPPPLHTITLLLVVVVLTLFVDLTTSHTCSSHQADKSSSCPPFISPPSFPFASSPGCGHPYFQIRCSSPHSIIFINDLSFSVLRHEPNSSSLFLFPDPEPSVPHPTHSQCSAASLPSLPKRSINLSGSPFRFSDVSCSRLSVLRPCPPLNLPNCSLCSWDCELLKLPVRLLQGCEPKHHSVSEQGCQEDVLDYLNRFLKWGIQVEWDEDRDTYFSNCSACHAKNGVCGYNSSDPQKPFICFSSQTQLSSPMPPWIRRDNPNRIVLLCTIFIFTCLLLVLAVATAIFRSRGLKSSATEEDPTTLFLHRHRSANLLPPVFTYEELETSTNRFDPKRKIGDGGFGSVYLGQLYDGRIVAVKKLHRPHTAAAATGRAASTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGPKSLYRKGALTWQVRVDAALQTAMAIEYLHFSVQPAIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVYPESSSSSSGHVWTGPQGTPGYLDPDYHRSFRLTEKSDLYSFGVVLFELISGMKAVDLSRDKREVALADLVVSKIQVGSLHQVVDPVLILEGEAMGTINAVAELAFRCVAADKDDRPDAKEVVAELKRIRNRTRVHRASSVAPDVPKA* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00909 710 SUPERFAMILY Protein kinase-like (PK-like) 382 688 IPR011009 -
Eupl04g00909 710 Pfam Protein kinase domain 402 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00909 710 FunFam Putative serine/threonine-protein kinase At1g18390 family 376 483 - -
Eupl04g00909 710 ProSitePatterns Tyrosine protein kinases specific active-site signature. 532 544 IPR008266 GO:0004672|GO:0006468
Eupl04g00909 710 ProSiteProfiles Protein kinase domain profile. 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00909 710 Pfam Wall-associated receptor kinase C-terminal 258 313 IPR032872 -
Eupl04g00909 710 Gene3D Transferase(Phosphotransferase) domain 1 484 705 - -
Eupl04g00909 710 ProSitePatterns Protein kinases ATP-binding region signature. 406 429 IPR017441 GO:0005524
Eupl04g00909 710 Gene3D Phosphorylase Kinase; domain 1 376 483 - -
Eupl04g00909 710 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 82 695 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00909 Eupl-Chr4 13928749 13931553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00909 70 697 Receptor kinase-like Gene Family AT1G69910 61.515 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Eupl04g00909 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00909 - - vvi:100241694 902.123