Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00908 ATGACCGTTAAGGGTGGCACGAGCCAGGCGTGCGCTGCGTGCAAATACCAACGGAGAAAGTGCGCGTCAGATTGTCAGCTCGCTCCCTACTTCCCTCCCGATCAACCAAAGAGATTCCAGAATGCTCACAAGCTCTTCGGCGTAAGCAATATTTTGAAAATACTAAAGCATCTAAATCAAAGTCAGAAAATGGAAGCCATGCGATCCATCGTTTTCCAAGCTGACATCCGCGACAAATTCCCCGTCCATGGATGCTACGGTTTCATCTTGCAATTACAACATCAACTTCAACAAGCCCAACTCGAACTTGACGCCGTTAACACACAGCTCGCCATTTGTAGACAACAACAACAAGAACAAGAACAACAACAACAATCTCCATCTAACGTTCTCCCACTCTTCCAAAATCATCATCACCCACCATTCAGTCCTGTTTACAATGCAACCGCGTACATCGAATCTCCGTCGAGGGATAACTTAATGAATCCTTTATGGCTACAGCATTCTTATGATAACAATCAATCTCAATTGGTTTCTTCACATTCACTTCCTTATGAACAACAAGGGGCAGAAGTACCGCAAGATTACGATGAGATGCCGTCTTTTTTCGATACCCTTGATGATAGACAATCATATTTGGATTCGAAGGATGCATACGATGAGTCCAGCCCGGAGTCGTCGTTGAAGGATACGACACAATCAATTCAACATGTTCCAGAGAATGAACTAAATACTGCTGCTGCATGCTTTAGTCTTACGAGTGTCAACTAA 771 0.441 MTVKGGTSQACAACKYQRRKCASDCQLAPYFPPDQPKRFQNAHKLFGVSNILKILKHLNQSQKMEAMRSIVFQADIRDKFPVHGCYGFILQLQHQLQQAQLELDAVNTQLAICRQQQQEQEQQQQSPSNVLPLFQNHHHPPFSPVYNATAYIESPSRDNLMNPLWLQHSYDNNQSQLVSSHSLPYEQQGAEVPQDYDEMPSFFDTLDDRQSYLDSKDAYDESSPESSLKDTTQSIQHVPENELNTAAACFSLTSVN* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00908 256 Coils Coil 89 123 - -
Eupl04g00908 256 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Eupl04g00908 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 139 - -
Eupl04g00908 256 MobiDBLite consensus disorder prediction 215 234 - -
Eupl04g00908 256 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00908 Eupl-Chr4 13920701 13921856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00908 1 114 AS2 family AT3G47870 63.158 1.79e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl04g00908 LOB 1.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00908 - - nnu:104596493 345.51