Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00906 ATGGAGAGCAGCAAATGGATTGCAACGGTCGCGAGCGTATGGATTCAGTGTAGCAGCGGCTCATCATACGCCTTCGGTATATACTCACCGCTGCTGAAATCGAGTCAGGATTACGATCAATCCACCCTGGACTCCATCGCCGTCTTCAAAGACATCGGAGCCAACGCTGGAATTCTATCTGGCCTTCTTTACACCGCAGTTACAGCCCGTCCTTCTCGTTCTCCTTCTTCTTTCTTCACCAGAGTTCGTGGGCCATGGGTAGTCCATGCCACCGGGGCGATATTGTGCTTCACGGGCTACTTCCTTATGTGGCTCTCAGTCACCGGAGTCCTTTCTCGACCTCCTGTCCCACTCATGTGCTTCTACATGTTCCTCGCAGCCCATGCTCAGACCTACTTTAACACTGCCAATGTCGTCACTGCCGTCCAAAACTTCCCTGATTACAGTGGGACCATTGTTGGAATCATGAAGGGATTTCTTGGTCTTAGTGGAGCAATACTAATTCAAGTATATGAGACAATATTCGAGGACAAACCAAGCTCTTTCCTTCTGATGCTTGCACTGTTGCCAACCCTCATTCCTCTGTTACTCATGTGTTTCGTAAGAATCCATCGTACAAATGGAGAGGACAAGAAACACCTGAATGATTTTTCAATCACTGCTCTGATCATTGCTGCTTATCTTATGGTCATAATAATCTTGGAAAACGTCTTCACTTTGGGATTAGGGGCACGTATAATTACATTTGTAATACTTCTCTTGTTACTTGCCTCCCCACTTGGCATTGCAATTAGGGTTCATTTCAGGGACTCTCAGATCTTTTTACCCACTTCATCTCCTGAAGAGACCCAATTGTTGGATGATTTGGAGCCACTAGAAGATGAGAAGATGTACGCGAGACATGATCCTATCGTGTATCGCGATCCTGATCAAGAGTCGCCTAACCAGGACAAGAGGATAACGCCACTGGGAGAAGACTTGAATCTTTTGCAGGCCATGGGCATACTTGACTTCTGGTTGCTTTTTCTAGCCATGGCATGTGGTATGGGCTCAGGATTGACCACAGTGAATAACATGAGTCAAATAGGAGGATCTCTTGGTTACACCAGTGTGGAAATAAGTACTTTGGTTTCTCTGTGGAGCATCTGGAATTTTCTTGGTCGTTTTGGAGCTGGGTATGTGTCTGATTATTTCCTGCACTTGAGAGGCTGGGCAAGGCCATTATTCATGGTCATCACTCTAGCAACCATGAGCGTCGGTCATGCAGTGATCGCGTCTGGCCTACCTGGGGCCCTGTATGCAGGTTCAATATTGGTGGGTGTTTGTTATGGTTCACAATGGTCATTAATGCCCACCATCACATCTGAAATATTCGGTGTAGTGCATATGGGCACCATATTCAACACCATCTCCATTGCGAGTCCCATCGGATCATATATTCTCTCCGTGAGGGTAGTTGGCTACATCTATGACAAAGAAGCATCATCAGGGAGTGGGAACACATGCATTGGTACCCACTGCTTCATGTTATCTTTTCTGATTATGGCATCTGTTAGTTTTTTTGGGTTCCTTATTGCCTTGGGATTGTTCTTCCGGACAAGAAGGTTTTATAAGCAGGTTATATTAGAAAGATTACATCATTCTGCTAGACAATAA 1656 0.4571 MESSKWIATVASVWIQCSSGSSYAFGIYSPLLKSSQDYDQSTLDSIAVFKDIGANAGILSGLLYTAVTARPSRSPSSFFTRVRGPWVVHATGAILCFTGYFLMWLSVTGVLSRPPVPLMCFYMFLAAHAQTYFNTANVVTAVQNFPDYSGTIVGIMKGFLGLSGAILIQVYETIFEDKPSSFLLMLALLPTLIPLLLMCFVRIHRTNGEDKKHLNDFSITALIIAAYLMVIIILENVFTLGLGARIITFVILLLLLASPLGIAIRVHFRDSQIFLPTSSPEETQLLDDLEPLEDEKMYARHDPIVYRDPDQESPNQDKRITPLGEDLNLLQAMGILDFWLLFLAMACGMGSGLTTVNNMSQIGGSLGYTSVEISTLVSLWSIWNFLGRFGAGYVSDYFLHLRGWARPLFMVITLATMSVGHAVIASGLPGALYAGSILVGVCYGSQWSLMPTITSEIFGVVHMGTIFNTISIASPIGSYILSVRVVGYIYDKEASSGSGNTCIGTHCFMLSFLIMASVSFFGFLIALGLFFRTRRFYKQVILERLHHSARQ* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00906 551 Gene3D MFS general substrate transporter like domains 331 539 IPR036259 -
Eupl04g00906 551 SUPERFAMILY MFS general substrate transporter 11 211 IPR036259 -
Eupl04g00906 551 SUPERFAMILY MFS general substrate transporter 224 535 IPR036259 -
Eupl04g00906 551 Pfam Major Facilitator Superfamily 341 535 IPR011701 GO:0022857|GO:0055085
Eupl04g00906 551 CDD MFS_Mch1p_like 4 522 - -
Eupl04g00906 551 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 538 - -
Eupl04g00906 551 Pfam Nodulin-like 5 263 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00906 Eupl-Chr4 13891351 13896498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00906 4 547 Nodulin-like Gene Family AT1G74780 62.569 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00906 - - ming:122077476 796.964