Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00896 ATGTCCGAAGAAGCCTCGCCGGTCGCTGCGGCGATTCCCCAAGAGGGATCTTCCCCGGAAGAGCAGTGCCGGAACAACAATAACAGCAGCAACAATCACACCCGAAGAAAAGAGCGTCTCCCCCGCGCATGCACTGCTCGCTCCTCTTCTCGCCTTTTTCCCTCCGCCCCGGCCGTTGATCGCAAACCCGGTCTTACCAAAAAAGAGAAAATCGTGCACGCCCAGGAGCAGCAGCAATGCAGCAAGATTATTACGCCGCTTGTTAACTCGCCTCCGCCTTCGCAACTGCCGAGGTGGAGTCTCCGCTCGATGTGGGAGTTGGCTTCTCTTTTTAACTTTCTACATATTTTTAGGCCGCTTTTGAATATTGCGGTGGAGTTCTCAGCGGAGGAGCTTGAGACTGCTTTGATTACACCGAATAGCACTTTGGATGATATACATATACCGCTGTTAAGGGCAATCCCTCCCGTTACCCGGATGGCGTTGGGGCGTGCTACTTGGGTTACAGTGTTATGCAGAAAGTTGAGGGACTGGTGGCATTGGGTAGCAGATGGCGAGATACCAATTGTTGCATCTCATGGGACGGAGGTCGAAGTATACAAGGCACTTGATCCCGGGACTCGTGTAGTGATTCTGAAAGCGCTGTGTGACATCCGTGTCGAGCAAGAAGATATTCGAAACTATATTGACGATAGTTTAAAACATGGTGTACAACTTTCGGTATTTCGTAAAGAACGTATTGGGGGCAATTCACAGGGAATTTCATACTGGTATGAAGATGATCCTATTATTGGTCATCGGTTGTACCGGGAGATAAGAAAAGTTGAGGTAAAAAAGGTGAAGGCAAAGGGAATTCCATCCCTTCCCACTGTATCTTGCCAGTGGGAAACAGTTGCAACCAATTTGGATGAATTCCAAGAAGTTTCTGAGAAGCTTTTCTCGAGTAAAAATAGAACAGAGGCGGCACTTGGAAAGAAGTTAAAAATAGACTTGCTTCCAGAGATAGAGAAGATCCATAAGAGGAAAGAGAGGTTGCTGAAAAAACAACATAGAGAAGCCATCCTTCTTGATAGCTTTTTGGGTTCAGATGGGCTTGTCTCAGGACGCTCCCTCCGTGACAGAAAACCCGTCACCTATACTTTTGATGATTTTGACCGGTCAATCAATGAGGCTATTAAAATAACCAAGCGAAGACAACTCTCCCCAGAACCTGTTGTCAGAAGAGAAGTCGTGGTGAAACCTGAGGCATCTTCTAATGGTAGATGGAATGGTTCTTCACATGCCCCTCAAAATGTCTCGTATGATGCACTGTCCCCAAAGTCAACTGATTATGAAGAAACTGATGTAGAGGATAAATCTGGACCTCTGGACCGCAGCAATCGGCGGAGGCAGAGGCCTCAGAGATACTCAGAAAAAGAGTTCGTTGAAGCTGTTTCAGATAATGAGGCAGACTTTGACAGTGATGATGATATAGTTGGAGAAGCAATATACGACGAGGAGTATCTGAGGAGCCGGAAGCAGAGGAAGGTGTCCAGCAGCTCCGAGGGAGACGAGGAGTACCATTGGGATGAAGAAAATGCCGAAGATGAGGAAGAAGAAGAAGATGCTTCTTTGAATAGTAGTGAGGATACCGATGAGCCCCACAGATCTGGGAAACTCCTGAATCGTAGCAAGAGAGGAACCAAATTAAGGTCTGTTGATGAGCTTCAGTCAGGCCTGAGACGGAGCAAGAGGGCCACACGTAACCGTATCAATTATCGACAGTATGAGCTTTCAGAATCAGAAGCTGACTCTGCGAAACCTGAGAAGTTAAATGCCTTGGAAGGGTGCTCAGATGCAAGCAGTAATGTGGAATACTCAATGGGAAGTCAGGATTCCCAGGGCAATGAGGATGAGCAGGAAGTGAAAGTTGACCAATCGGTTCAAGAATACAACGATACGGCAGACAAAGAACAAATCCGTTCACCTGAGAAAACAAATAGCTCAGGTCAAGAAGAAGCCAAGGGTGTAGGGAAAAGGCGATTTTTGGACTTAAACGAGCTTGCCCCAGGTACTGGTTTCGATGATGGCTCTAACACAATAATGGGAGATGAAGATACGGACAACTTCTGA 2112 0.4702 MSEEASPVAAAIPQEGSSPEEQCRNNNNSSNNHTRRKERLPRACTARSSSRLFPSAPAVDRKPGLTKKEKIVHAQEQQQCSKIITPLVNSPPPSQLPRWSLRSMWELASLFNFLHIFRPLLNIAVEFSAEELETALITPNSTLDDIHIPLLRAIPPVTRMALGRATWVTVLCRKLRDWWHWVADGEIPIVASHGTEVEVYKALDPGTRVVILKALCDIRVEQEDIRNYIDDSLKHGVQLSVFRKERIGGNSQGISYWYEDDPIIGHRLYREIRKVEVKKVKAKGIPSLPTVSCQWETVATNLDEFQEVSEKLFSSKNRTEAALGKKLKIDLLPEIEKIHKRKERLLKKQHREAILLDSFLGSDGLVSGRSLRDRKPVTYTFDDFDRSINEAIKITKRRQLSPEPVVRREVVVKPEASSNGRWNGSSHAPQNVSYDALSPKSTDYEETDVEDKSGPLDRSNRRRQRPQRYSEKEFVEAVSDNEADFDSDDDIVGEAIYDEEYLRSRKQRKVSSSSEGDEEYHWDEENAEDEEEEEDASLNSSEDTDEPHRSGKLLNRSKRGTKLRSVDELQSGLRRSKRATRNRINYRQYELSESEADSAKPEKLNALEGCSDASSNVEYSMGSQDSQGNEDEQEVKVDQSVQEYNDTADKEQIRSPEKTNSSGQEEAKGVGKRRFLDLNELAPGTGFDDGSNTIMGDEDTDNF* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00896 703 MobiDBLite consensus disorder prediction 588 602 - -
Eupl04g00896 703 Pfam DDT domain 111 154 IPR018501 -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 496 517 - -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 629 656 - -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 416 703 - -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 480 495 - -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 418 440 - -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 560 575 - -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 518 540 - -
Eupl04g00896 703 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 200 230 IPR028942 -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 609 628 - -
Eupl04g00896 703 MobiDBLite consensus disorder prediction 1 62 - -
Eupl04g00896 703 PANTHER REMODELING AND SPACING FACTOR 1 35 658 IPR028938 GO:0006355|GO:0031213
Eupl04g00896 703 MobiDBLite consensus disorder prediction 441 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00896 Eupl-Chr4 13757271 13779353 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Eupl04g00896 DDT 9.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00896 - - ming:122079308 1023.08