Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00891 ATGGTAGACGATAATGCTGGTGGTGGTGGCGATGCTGAGTCTATTTGTGCTCAGAAGAGCGGACCGTTAAGATCTTCAAGTCTCAGTACTAGCAGCACTGTTACTGGTACTTGTTCCACTAACAGTATAAGTAGTAAGGTTAGTGATGGTTGTTTTTATGGAAAGCAAATCGAGGGCAGAGCTGAAGAGGGTACTAAAAGTGGTGAATTTGTAAACTGCTTTTTAGAAAGCGAGAAGAGCAGCTTGAGCTCTCCGAGCTACTGCAGCAGCAGCATTGATGTAAATGAGACCAGTTGCAGAAGCTTTTGCTCAAACAAGCCTCATAAGGGTAACGATCTTCGATGGGATGCGATTCAGTGTGCGAAGTCGAAAAATGGGGTTCTGGGTTTGAGCAATTTCAGGCTTTTGAAGAAGCTTGGGTGTGGAGATATTGGGAGTGTGTACTTGGCTGAGCTGAGAGGGATAGGATGTTTGTTTGCAATGAAGGTTATGGACAAAGGGTTGTTAGAGGGGAGGAAGAAGTTACTGAGGGCACAAACAGAGAGAGAGATTTTGGGTTTGTTGGATCATCCGTTTCTTCCGACACTTTATTCACATTTTGAGACGGAGAAGTTTTCTTGCTTGCTAATGGAGTTTTGCAGTGGTGGGGATCTCCATACCCTCCGGCAAAGGCAACCGGGCAAGCATTTTTCAGAGCAAGCAGCAAGGTTTTATGCTTCAGAAGTGCTTCTTTCCCTTGAGTATCTACACATGATGGGGGTGGTGTATAGGGACTTGAAGCCTGAAAATGTTTTGGTGAGGGAGGATGGCCATATCATGCTTTCCGATTTTGATTTGTCATTGAGGTGTTATGTGAGTCCCACGCTCATAAAATCCAGTACCGAATCATCTCGGAGGATCTCTAGCTACTGTATTCAGCCAGCATGTATAGATCCAGCATGCAAATTAACAGCTTGTGTGGAGCCAGCTTGTTTGCAGCCCTCATGCTTTACTCCCCGTCTCTTCCAGTCAAAGACAAAGAAGGTGAGGAATGAAGGTGTAAATCTGGCCCGTATGGATTCTCTTCCCATGCTTATTGCAGAGCCAACTGGTGCTCGCTCAATGTCATTCGTAGGGACCCATGAATATTTAGCTCCTGAAATAATTAAAGGGGATGGTCACGGGAGTGCTGTGGATTGGTGGACATTTGGTATTTTCCTGTACGAATTGCTTCACGGGAGGACACCATTCAGGGGCAATGGCAACCGTGAGACATTGTTCAATGTTGTTGGGCAACCACTAAAGTTCCCAGAGGGATCTACTGTCAGTTTTGCTGCTAAAGATTTGATCAGGGGGTTGCTCATAAAGGATCCACAACAGAGATTAGGATACAAAAGGGGTGCCACAGATATCAAACAGCACCCCTTCTTTGAAAATGTGAATTGGGCTCTAATACGCAGTACTCACCCTCCAGATATTCCTAAACCAGTTGAAGTTTCTTCTTTTAATCACACAATCAGATCATCTGAGCCGCCAAATGACAAGGGAGCTACTGATTCAGATAGATCATCTGGTCCATACCTAGACTTTGAATTTTTCTAG 1581 0.4491 MVDDNAGGGGDAESICAQKSGPLRSSSLSTSSTVTGTCSTNSISSKVSDGCFYGKQIEGRAEEGTKSGEFVNCFLESEKSSLSSPSYCSSSIDVNETSCRSFCSNKPHKGNDLRWDAIQCAKSKNGVLGLSNFRLLKKLGCGDIGSVYLAELRGIGCLFAMKVMDKGLLEGRKKLLRAQTEREILGLLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQAARFYASEVLLSLEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCYVSPTLIKSSTESSRRISSYCIQPACIDPACKLTACVEPACLQPSCFTPRLFQSKTKKVRNEGVNLARMDSLPMLIAEPTGARSMSFVGTHEYLAPEIIKGDGHGSAVDWWTFGIFLYELLHGRTPFRGNGNRETLFNVVGQPLKFPEGSTVSFAAKDLIRGLLIKDPQQRLGYKRGATDIKQHPFFENVNWALIRSTHPPDIPKPVEVSSFNHTIRSSEPPNDKGATDSDRSSGPYLDFEFF* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00891 526 ProSiteProfiles Protein kinase domain profile. 133 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00891 526 MobiDBLite consensus disorder prediction 1 33 - -
Eupl04g00891 526 FunFam serine/threonine-protein kinase D6PK-like 217 284 - -
Eupl04g00891 526 Pfam Protein kinase domain 134 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00891 526 Pfam Protein kinase domain 367 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00891 526 Gene3D Phosphorylase Kinase; domain 1 489 500 - -
Eupl04g00891 526 CDD STKc_phototropin_like 131 489 - -
Eupl04g00891 526 SMART serkin_6 133 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00891 526 Gene3D Phosphorylase Kinase; domain 1 131 212 - -
Eupl04g00891 526 Gene3D Transferase(Phosphotransferase) domain 1 366 488 - -
Eupl04g00891 526 MobiDBLite consensus disorder prediction 489 526 - -
Eupl04g00891 526 FunFam serine/threonine-protein kinase D6PK-like 365 488 - -
Eupl04g00891 526 SUPERFAMILY Protein kinase-like (PK-like) 111 503 IPR011009 -
Eupl04g00891 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Eupl04g00891 526 FunFam Serine/threonine-protein kinase D6PK-like 131 216 - -
Eupl04g00891 526 MobiDBLite consensus disorder prediction 19 33 - -
Eupl04g00891 526 PANTHER FLIPPASE KINASE 1-RELATED 29 493 - -
Eupl04g00891 526 Gene3D Transferase(Phosphotransferase) domain 1 213 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00891 Eupl-Chr4 13644915 13647570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00891 89 526 AGC Kinase Gene Family AT5G40030 77.045 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl04g00891 Pkinase 9.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00891 K08286 - ming:122075581 814.683