Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00877 ATGAGTGGATGGGAGAGGGTTAGGTCATCAACGTCCCGTCTCGGAGGTGGTGGAAGAGGGTGGACGAGGATTGTGCAGATGGGCGAGCGCCAGACTTCGTCCCACACCGTTCGTCTCGGTCGGGTCCAGCCCCAGCATCCTGGGCACCGCACGATCTACTGCAACGATCGAGAGGCCAATCTTCCCGTCAAATTCAAGGGGAATTCTATATCAACTACGAAGTACAACATTCTCACCTTTTTACCAAAAGGGTTGTTTGAACAGTTCAGGCGGGTAGCTAATTTGTACTTTCTTATGATCTCAATCTTATCAACGACACCGATCAGTCCTGTGCATCCTATAACAAATGTGGTTCCACTGAGTCTAGTGCTTCTTGTCTCTCTTGTTAAAGAGGCATTCGAAGACTGGAAGCGCTTGCAGAATGATAAGGCGATAAATAGTACCCCTATAGATGTATTGCAAGATCAGAAGTGGGAAAGTATTCCCTGGAAGAAACTGCAGGTTGGGGACATTGTTAGAGTTAAGCATGATTGTTTCTTTCCTGCCGATCTTTTGTTCCTTGCTAGTTCAAATCCAGATGGTGTCTGCTACATTGAGACTGCAAATCTTGATGGGGAGACAAATTTGAAAATCAGAAAAGCATTGGAAAGGACTTGGGATTACTTGACTCCTGATAAGGCCTCTGAGTTTAAAGGAGAAATACAGTGTGAACAACCAAATAACTCGTTGTACACTTACACCGGCAATCTTATATTCCAAAAGCAGACACTTCCTCTTTCCCCGAATCAAATTCTATTGCGAGGATGCAGTCTCCGGAACACAGAATACATAGTTGGGGCTGTTATATTTACCGGGCATGAAACCAAGGTTATGATGAATGCCATGAATGTTCCTTCCAAAAGAAGTACTTTGGAGAGAAAACTTGACAAACTTATTCTTACTCTCTTTGGTGCTCTCTTCCTAATGTGTCTCATTGGAGCCATTGGCAGTGGTGTATTCATAAACCGCAAGTACTACTACCTAGGTCTTGATGGAGGTGTGGAAGATCAGTTTAACCCTAGAAACAGATTTGTGGTAGCTATACTGACCATGTTTACATTAATTACGTTGTACTCAACAATTATCCCTATTTCTCTATATGTTTCCATCGAGATGATCAAATTTATCCAGTCCACTCAGTTTATCAACAAGGACTTACATATGTATCATTATGAAACCAACACCCCTGCATTGGCACGGACATCTAATCTGAATGAGGAACTTGGACAGGTGGAATACATATTTTCTGATAAAACGGGAACTTTAACAAGAAATCTGATGGAGTTTTTTAAGTGTTCAATTGGAGGAGAGGTGTATGGAACTGGTGTCACTGAAATAGAAAGAGGAGGAACTCAGCGGAATGGCATTAAAGCTGAAGAGGTACCTAAATCAGCTAGCACAGTACGTGAGAAAGGTTTCAATTTTGATGATGCTAGGCTTATGCGAGGTGCTTGGAGGAATGAGCGTAATCCTGATGCCTGCAAGGAATTCTTCAGATGCCTTGCTATATGTCATACTGTGCTTCCTGAAGGTGATGAATCTCCAGAGAAGATTACATATCAGGCTGCATCTCCCGATGAGGCTGCTTTGGTTACTGCTGCAAAGAACTTCGGCTTCTTCTTTTACAGGCGTACACCAACTATGATTATGGTTCGTGAATCACATGTCGAGAAGATGGGTAAAATCCAAGATATGTCATATGAGATTCTAAATGTTTTAGAGTTCAACAGTACAAGGAAACGCCAGTCTGTAATATGCCGTTATCCAGATGGCAGGCTCGTTTTGTACTGCAAGGGTGCTGATACTGTCATCTTTGAAAGATTGGCGGATGGAAATAAGGACATAAAGAACTCAACCAGGGAACACTTGGAACAGTTTGGATCTGCTGGTTTACGTACACTTTGCCTGGCCTACAGAGATTTAAGTATTGAGATGTATGAGATCTGGAATGAGAAATTCATCCAAGCAAAGTCTTCTTTACGAGACCGTGAAAAGAAGTTGGATGAGGTATCGAATCTTATAGAAAAAGATCTTATTCTGATTGGGTGCACTGCTATAGAAGACAAGCTTCAAGAAGGAGTACCTTCTTGTATAGAGACTCTTTCTAGGGCTGGAATCAAGATTTGGGTGCTAACAGGGGACAAGATGGAAACGGCAATAAATATAGCCTATGCGTGTAGCTTGATCAACAATGACATGAAGCAGTTCATCATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAAGTAGGGGTGACTCAGTGGAGACCGCACGCTTTATCAAGGACACAGTGAAACAAGAACTGAAGAGATGCCTCGAGGAAGCACAAAACTATCTGTACACTCTATCTGGACCCAAATTGGCACTTGTAATTGATGGGAAGTGTTTGATGTATGCATTGGACCCAACTTTACGAGGAAATCTGCTTAACCTGAGCTTGAATTGCAATTCAGTAGTTTGCTGTCGAGTTTCTCCACTACAAAAAGCACAGGTGACTAGCCTGGTCAAGAATGGTGCACGGAAGATAACACTCAGTATCGGTGATGGTGCAAATGATGTGAGCATGATTCAAGCTGCTCATGTTGGCATTGGCATAAGTGGACTAGAAGGAATGCAAGCAGTCATGGCTAGTGATTTCGCGATTGCTCAGTTTCGCTTTCTCACTGATTTACTTCTCGTTCATGGACGGTGGTCATATCTCAGAATATGCAAGGTTGTGACATATTTCTTTTACAAGAATCTTAGTTTCACTTTGACTCAATTTTGGTTCACCTTCCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTCCAGTCTTTGTATAATGTCATTTTTACAGCTCTGCCTGTGATCATTGTTGGACTGTTTGACAAGGATGTCAGTGCGTCCCTTTCCAAGAAGTACCCAGAGCTATACAAGGAAGGAATAAGAAATACCTTCTTCAAATGGAAAGTTGTGGGTGTCTGGGCTTTCTTCTCTTTGTACCAGTCATTAGTCTTCTATCATTTTGTGACTGCTTCAAGTCATAGAACTCAAAATTCATCTGGTAAGATGTTTGGGCTCTGGGATGTCAGCACAATGGCCTTCACTTGTGTAGTAGTAACTGTCAACTTGCGTCTTCTTATGGCCTGTAATTCAATCACAAGGTGGCACCACATAAGTATCGTGGGAAGCATTTTAGCGTGGTTTGTATTCATCTTTCTATATTCTGGAATCATGACCCCATATGATAGACAAGAGAACATATTTTTCGTCATTTATGTCTTAATGAGTACATTCTATTTCTATCTCTCACTTCTTCTTGTTCCCATTGTTGCACTTCTCGGTGATTTCATCTACCAAGGGCTTCAAAGATGGTTCTTCCCCTATGACTATCAGATCATTCAGGAAATCCACAAAGACGATCCTGATGAAAGCAGCAGGGAAGAGCTGCTGGAGATTAGAAACCAGCTGACACCAGATGAGCAGAGGAGCTATGCGATCTCTCAGCTTCCACGAGAGACATCAAAGCACACTGGTTTTGCTTTCGACTCACCGGGGTATGAATCGTTTTTTGCTTCACAGCAAGGTGTTTTTGCCCCCCAAAAGGCATGGGATGTTGCACGGAGAGCCAGTATGAGGACACCCAAAAACAATTGA 3687 0.4242 MSGWERVRSSTSRLGGGGRGWTRIVQMGERQTSSHTVRLGRVQPQHPGHRTIYCNDREANLPVKFKGNSISTTKYNILTFLPKGLFEQFRRVANLYFLMISILSTTPISPVHPITNVVPLSLVLLVSLVKEAFEDWKRLQNDKAINSTPIDVLQDQKWESIPWKKLQVGDIVRVKHDCFFPADLLFLASSNPDGVCYIETANLDGETNLKIRKALERTWDYLTPDKASEFKGEIQCEQPNNSLYTYTGNLIFQKQTLPLSPNQILLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFGALFLMCLIGAIGSGVFINRKYYYLGLDGGVEDQFNPRNRFVVAILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGVTEIERGGTQRNGIKAEEVPKSASTVREKGFNFDDARLMRGAWRNERNPDACKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTMIMVRESHVEKMGKIQDMSYEILNVLEFNSTRKRQSVICRYPDGRLVLYCKGADTVIFERLADGNKDIKNSTREHLEQFGSAGLRTLCLAYRDLSIEMYEIWNEKFIQAKSSLRDREKKLDEVSNLIEKDLILIGCTAIEDKLQEGVPSCIETLSRAGIKIWVLTGDKMETAINIAYACSLINNDMKQFIISSETDAIREVESRGDSVETARFIKDTVKQELKRCLEEAQNYLYTLSGPKLALVIDGKCLMYALDPTLRGNLLNLSLNCNSVVCCRVSPLQKAQVTSLVKNGARKITLSIGDGANDVSMIQAAHVGIGISGLEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLSFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYKEGIRNTFFKWKVVGVWAFFSLYQSLVFYHFVTASSHRTQNSSGKMFGLWDVSTMAFTCVVVTVNLRLLMACNSITRWHHISIVGSILAWFVFIFLYSGIMTPYDRQENIFFVIYVLMSTFYFYLSLLLVPIVALLGDFIYQGLQRWFFPYDYQIIQEIHKDDPDESSREELLEIRNQLTPDEQRSYAISQLPRETSKHTGFAFDSPGYESFFASQQGVFAPQKAWDVARRASMRTPKNN* 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00877 1228 Pfam Phospholipid-translocating P-type ATPase C-terminal 888 1138 IPR032630 -
Eupl04g00877 1228 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 435 699 IPR023299 GO:0000166
Eupl04g00877 1228 Pfam Phospholipid-translocating ATPase N-terminal 52 116 IPR032631 -
Eupl04g00877 1228 Gene3D - 695 900 IPR023214 -
Eupl04g00877 1228 FunFam Phospholipid-transporting ATPase 693 900 - -
Eupl04g00877 1228 Pfam Cation transport ATPase (P-type) 527 620 - -
Eupl04g00877 1228 SFLD C1.7: P-type atpase like 410 911 - -
Eupl04g00877 1228 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 1138 IPR023298 -
Eupl04g00877 1228 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 44 1187 - -
Eupl04g00877 1228 FunFam Phospholipid-transporting ATPase 126 295 - -
Eupl04g00877 1228 NCBIfam HAD-IC family P-type ATPase 833 939 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl04g00877 1228 MobiDBLite consensus disorder prediction 1 21 - -
Eupl04g00877 1228 FunFam Phospholipid-transporting ATPase 537 692 - -
Eupl04g00877 1228 FunFam Phospholipid-transporting ATPase IC 425 437 - -
Eupl04g00877 1228 SUPERFAMILY HAD-like 423 916 IPR036412 -
Eupl04g00877 1228 Gene3D - 128 295 - -
Eupl04g00877 1228 SUPERFAMILY Calcium ATPase, transduction domain A 149 291 IPR008250 -
Eupl04g00877 1228 NCBIfam phospholipid-translocating P-type ATPase 65 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Eupl04g00877 1228 Gene3D - 539 694 IPR023299 GO:0000166
Eupl04g00877 1228 ProSitePatterns E1-E2 ATPases phosphorylation site. 430 436 IPR018303 -
Eupl04g00877 1228 Pfam E1-E2 ATPase 148 382 - -
Eupl04g00877 1228 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
Eupl04g00877 1228 PRINTS P-type cation-transporting ATPase superfamily signature 428 442 - -
Eupl04g00877 1228 CDD P-type_ATPase_APLT_Dnf-like 67 1021 - -
Eupl04g00877 1228 SFLD p-type atpase 410 911 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00877 Eupl-Chr4 13464471 13504066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00877 29 1226 Primary Pumps ATPases AT1G59820 79.066 0.0 2022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00877 K14802 - nnu:104596300 2167.12