Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00869 ATGGTCTCTACATCTCAGAAGAAAAAAACCCTTCACTCGATCCTCGCAGGAAAGCTCAGCAAACTCAGTATCCCATCTTCAACATCCACATCTGGAGAAGACTTCGATTTCTCGGAAGTCTTCGGTTATTCAACTTCCCACGCTTCTTCTTCTTCACCATTTCTTCGAGACCCAGAAATCATTCAAACCCGATCCCACTCTTTGGTGGGCCCTTCACCTCGGTTTACCACCTCGACTTCTCTCCCTCTTCGGGATTTTGATGGAGAAAGTGGTTTCCAAAGTTCTGATGGAGAGGAAGATGTCGACGGTGGTTCCGAGAAGGTGAAGGAGAAGGAGGAGAAAGAAGAGAGTAAAATGGGTCCTGGGGATTTTGAGATCTTGAGGGTTATTGGGCAAGGCGCATTTGGTAAGGTTTTTCAGGTGAGGAAGAAGGATAATAGCGATATCGGTGGCTGTGGCGATGATGGGATTGTTGCGATGAAGGTGATGAGGAAGGATACCATTATAAAGAAGAATCATGTAGATTACATGAAGGCGGAGAGGGATATACTTACCAAGGTGGTGCACCCGTTCATCGTCCAGCTTCGATACTCCTTCCAGACAAAATCTAAGCTGTATCTGATCCTGGATTTTATAAATGGAGGGCATCTCTTCTTTCATCTGTATCGTCAGGGAATCTTCAGTGAGGATCAAGCAAGGGTTTATACCGCCGAGATAGTCTCTGCTGTTTCACATCTTCACAAGAACGGGATCGTGCATCGGGATCTTAAACCTGAAAATATTCTTATGGATGCGGACGGGCATGTTATGCTAACTGATTTTGGACTGGCAAAGGAAATTGACGAATCGAGCAGATCAAATTCAATGTGTGGAACAACAGAATACATGGCACCAGAGATCTTACTGTCCAAGGGCCACAATAAAGATGCAGATTGGTGGAGCGTAGGGATACTTTTGTTTGAAATGCTAACTGGGCAGCCACCTTTCGCGAATGCAAACAGGCAGAAGCTTCAGCAGAGAATCATTAAAGAAAAAGTGAAACTCCCACCGTACCTGAGCAGTGAAGCTCACTCTTTACTTAAGGGGCTACTGCAAAAGGAGCCATCAAGAAGGTTAGGCAGTGGGCCGAGTGGAGGGGATGAAATAAAAAATCACAAGTGGTTTAAGCAGATCAATTGGAAAAAGTTGGAGGCAAGAGAACTGCAGCCCAAATTCAAGCCAGACGTGAGTGGGAGTGACTGCACGGCCAATTTCGATCAGTGCTGGACAGAAATGCCTCCAAACGATTCACCAGCTCCCACACCAACCGCCGGTGAACATTTCCAGGGATATACTTATGTGGCACCTAACCCTTGGCTTTCTGCTGAGCCATGA 1374 0.4622 MVSTSQKKKTLHSILAGKLSKLSIPSSTSTSGEDFDFSEVFGYSTSHASSSSPFLRDPEIIQTRSHSLVGPSPRFTTSTSLPLRDFDGESGFQSSDGEEDVDGGSEKVKEKEEKEESKMGPGDFEILRVIGQGAFGKVFQVRKKDNSDIGGCGDDGIVAMKVMRKDTIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARVYTAEIVSAVSHLHKNGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGILLFEMLTGQPPFANANRQKLQQRIIKEKVKLPPYLSSEAHSLLKGLLQKEPSRRLGSGPSGGDEIKNHKWFKQINWKKLEARELQPKFKPDVSGSDCTANFDQCWTEMPPNDSPAPTPTAGEHFQGYTYVAPNPWLSAEP* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00869 457 ProSiteProfiles AGC-kinase C-terminal domain profile. 389 456 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl04g00869 457 MobiDBLite consensus disorder prediction 65 84 - -
Eupl04g00869 457 Gene3D Phosphorylase Kinase; domain 1 123 430 - -
Eupl04g00869 457 Gene3D Transferase(Phosphotransferase) domain 1 212 407 - -
Eupl04g00869 457 SUPERFAMILY Protein kinase-like (PK-like) 122 449 IPR011009 -
Eupl04g00869 457 PANTHER RIBOSOMAL PROTEIN S6 KINASE 63 450 - -
Eupl04g00869 457 ProSitePatterns Protein kinases ATP-binding region signature. 130 161 IPR017441 GO:0005524
Eupl04g00869 457 Pfam Protein kinase C terminal domain 409 446 IPR017892 GO:0004674|GO:0005524|GO:0006468
Eupl04g00869 457 Pfam Protein kinase domain 124 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00869 457 MobiDBLite consensus disorder prediction 44 58 - -
Eupl04g00869 457 SMART serkin_6 124 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00869 457 FunFam Non-specific serine/threonine protein kinase 122 236 - -
Eupl04g00869 457 ProSiteProfiles Protein kinase domain profile. 124 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00869 457 FunFam Non-specific serine/threonine protein kinase 212 407 - -
Eupl04g00869 457 MobiDBLite consensus disorder prediction 44 119 - -
Eupl04g00869 457 SMART pkinase_C_6 389 448 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl04g00869 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Eupl04g00869 457 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00869 Eupl-Chr4 13329904 13335478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00869 22 449 AGC Kinase Gene Family AT3G08720 61.111 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Eupl04g00869 Pkinase 2.2e-74 CL0016