Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00868 ATGAACAGATCAAGAGAGGAAAACAGAGTTCTTCATCTTCTCCTCTCCTCCGCCATAGTTGTTCTCTTTGTTGGCTCCGTCGTCGCTGTAGAGGATGACTTTAAGTGTCTTGAAGGCTTGAAGGCCGCGCTCAGTGATCCTCAAAGAAAGCTCAATTCATGGAGCTTCTCCAACACCTCAGTCGGTTCTATCTGCAAATTTGTTGGCGTCTCGTGCTGGAACGAGAAGGAGAATCGCTTGATCGGTTTGCAACTCCCATCTATGGAGCTCGCAGGACAGATTCCTGAATCTTTACAGTACTGCTATAGCCTCCAGACGCTCGATCTCTCTGATAATGCTCTCTCCGGTACGATCCCCTCTCAAATCTGCAAATGGTTGCCTTACCTCGTAACCCTAGATCTCTCTCGCAACCGTCTCTCTGGATCGATTCCTCCTGACCTTTTTAATTGCAAGTATCTCAATAATCTTATCCTTGGCGACAATCGTCTTTCTGGTCCCATCCCTTACCAGCTCTCTCGTCTCAGTCGTCTAAAGAAGTTCTCGGTTGCTAATAACGATCTCTCTGGTCAGATCCCTTCGTTTTTTTCTGATTATGATTCTGCTAATTTCGACGGCAACAGCGGACTCTGCGGTCGGCCCCTTGGATCTAAGTGTGGTGCTTTGCGCAAGAGAAACCTCATAATCATCATTGCTGCCGGGGTTTTCGGTGCCGCTGCTTCGTTGCTGTTAGGTTTCGCACTTTGGTGGTGGTGCTTCGTTAGGTCAAGTCGTCGCCGCGGGAAGAGGACTGGGACCAGCAAAGATGATGATTGGGCCGAGCGATTGAGGTCTCACAAGCTTGTTCAGGTTTCCTTGTTTCAGAAGCCCCTTGTGAAGATCAAGTTGGCCGATTTAATGGCTGCAACCAACAATTTTGACCCGGAAAACATTATCATTTCGACTAGAACTGGGACTTCGTATAAGGCAGTACTGCCCGATGGGTCGGCCCTTGCCATCAAACGGCTCAACACTAACAAGCGCAGTGAGAAGCAATTCCGGTCGGAGATGAACAGATTAGGGCAACTTAGGCACCCAAATTTGGTGCCCCTTTTGGGATTCTGTGCTGTAGAAGACGAGAAGCTTTTGGTGTATAAGCACATGCCTAACGGGACTCTGAATTCTCTTTTGCACGGAAGTGGTAATACAAGTAGTCAGTACTATCCTTTGGATTGGCCGACGAGGCTTAAGATTGGTATTGGTACGGCAAAGGGGCTCGCTTGGCTTCACCACGGCTGCCGGCCGCCTAGCCTGCACCAAAACATAAGCTCCAATGTGATCCTCCTTGATGAGGACCTTGATGCTCGGATCACGGATTTCGGACTTGCAAAGCTCGTGAGTTCTACTGACTCTCATGAGAGCAGTTTCATACATGGGGATTTTGGAGAGTTAGGTTATGTGGCTCCCGAGTATTCAAGCACCATGGTTGCATCGCTGAAAGGGGATGTTTATGGGTTTGGGGTTGTGCTTCTTGAGTTGGTGACTGGGCAGAAGCCTCTTGAAGTCAGTAATGCTGAGGAAGGATTCAAGGGTAACCTTGTTGATTGGGTTAATCAGCTCACTGGCTCCGGTCGGACCAAGGATGTCATTGATAAGTCCCTTTGTGGAAAGGGTCAGGATGACGAAATTCTACAGTTTCTGAGGGTTGCAAGTGGTTGTGTGGCTTCTAGGCCCAAGGACAGATCTTCTATGTATCAGGTGTACCAATCGTTGAAGACCATTGGCGAGAGCCACAGTTTCTCAGAACAGTTCGATGAGTTTCCACTGATTTTTGGCAAACAAGATCCTGATCATCAGGAGTAG 1839 0.485 MNRSREENRVLHLLLSSAIVVLFVGSVVAVEDDFKCLEGLKAALSDPQRKLNSWSFSNTSVGSICKFVGVSCWNEKENRLIGLQLPSMELAGQIPESLQYCYSLQTLDLSDNALSGTIPSQICKWLPYLVTLDLSRNRLSGSIPPDLFNCKYLNNLILGDNRLSGPIPYQLSRLSRLKKFSVANNDLSGQIPSFFSDYDSANFDGNSGLCGRPLGSKCGALRKRNLIIIIAAGVFGAAASLLLGFALWWWCFVRSSRRRGKRTGTSKDDDWAERLRSHKLVQVSLFQKPLVKIKLADLMAATNNFDPENIIISTRTGTSYKAVLPDGSALAIKRLNTNKRSEKQFRSEMNRLGQLRHPNLVPLLGFCAVEDEKLLVYKHMPNGTLNSLLHGSGNTSSQYYPLDWPTRLKIGIGTAKGLAWLHHGCRPPSLHQNISSNVILLDEDLDARITDFGLAKLVSSTDSHESSFIHGDFGELGYVAPEYSSTMVASLKGDVYGFGVVLLELVTGQKPLEVSNAEEGFKGNLVDWVNQLTGSGRTKDVIDKSLCGKGQDDEILQFLRVASGCVASRPKDRSSMYQVYQSLKTIGESHSFSEQFDEFPLIFGKQDPDHQE* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00868 612 CDD STKc_IRAK 313 586 - -
Eupl04g00868 612 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 71 195 - -
Eupl04g00868 612 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 379 - -
Eupl04g00868 612 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 605 - -
Eupl04g00868 612 ProSiteProfiles Protein kinase domain profile. 305 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00868 612 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 219 - -
Eupl04g00868 612 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Eupl04g00868 612 SUPERFAMILY L domain-like 31 206 - -
Eupl04g00868 612 Gene3D Phosphorylase Kinase; domain 1 265 379 - -
Eupl04g00868 612 Pfam Protein tyrosine and serine/threonine kinase 329 580 IPR001245 GO:0004672|GO:0006468
Eupl04g00868 612 Gene3D Transferase(Phosphotransferase) domain 1 380 605 - -
Eupl04g00868 612 SUPERFAMILY Protein kinase-like (PK-like) 281 583 IPR011009 -
Eupl04g00868 612 PRINTS Leucine-rich repeat signature 104 117 - -
Eupl04g00868 612 PRINTS Leucine-rich repeat signature 126 139 - -
Eupl04g00868 612 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00868 Eupl-Chr4 13321307 13326665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00868 31 607 Receptor kinase-like Gene Family AT1G27190 68.103 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Eupl04g00868 PK_Tyr_Ser-Thr 6.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00868 - - nnu:104608009 927.932