Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00846 ATGCCCGCCATGTTTCATCCATGGCTTCTTCTTCTTCTTCTTCTCTCTCTCCTCTTCTCTCGCTCTTCTTCTCAATCTAGTCCTCCTCAAAACGTTGAGACTTTCTTTCCTCTTGATTCCCCTCCCAATTCTCCCTCTTTGCCTAATTCCCCCTCTTTGCCTAATTCTTCCAACAATCCTATCACCCCTCCCACACAAATTCCGGCACCACCACCACCTTCGTCACCGTCGTCAAACCGAAGTGTGGGTAAGGCTGTCGCAGCTACTGCAGCGAGCACACTTGTAATTGCCGGGGTCTTCTTCTTTTTCCTCCAGAGGTTCGCGATTGCTCGTCGGCGCCGTCGGAATGAGAAAACTGATACGGTTTTACGTCGAGAGACAACCGTACTCCCTCGCGAGGAATTCAAGCGTTTCGATGGAACTCTGAAAGGGTTAATTGTTGATGAGGATGGTCTAGATGTTCTTTACTGGAGAAAGCTTGAAGGTGGCCACCTAAAGACTAGTTTCCATAAGGAGATCATATCTAGACCTAATGAAGAAGATGAAAGGAGAGTTCGTAGTAGAAGAGAATCAAGAGATCGGCACACAAAATCTGAGCCAATTCAAGAAATTCCCTTGCTTCGTGGCAAATCTTCAAGTTCCTCTGCTCAAATTAGACCAGAGTTGCAAGAACCACATCGAATTACGTCCGCTCTTCGTGAATCGGTGGCTGTGGCGAAACCAGCATCGCCAAAACCACCACTACCAGCTCCTCCTCCTCCACCACCACCACCACCACCACCTCCACCTCCACCGGCAATTCCATTGAAGAAAAATCCAGCACCACCACCTCCACCACCACCAATTCCGGTGAAGAAAAATCCGGCACCACCACCTCCCCCACCAAAGGCAGGTAATGGTTTGGCTTCCTCGTTGAGACCGCCACCTGCACCGAGAGTGAAATCGAGTGGAAGTAGGCGAGCAGAGTCTTCATCGGTAGAGAAGTCGACCGACATTGCTACAGCTCAGACGAAGATGAAGCCATTACACTGGGATAAGGTGACAGCTAAGGCAGATCATTCAATGGTGTGGGACAAGATCAGTGACGGTTCTTTCCGATTTGATGATGACCTCATGGAAGCTCTGTTCGGTTACGTCGCCACCAACCGGAAATCTCCAGAGAGAAGAAACAACACAATAAACCAGGGCACCACCAACTCCGGTTCGCCTGCTCAGATCTTCATCCTTGATCCTCGTAAATCCCAAAACACAGCAATTGTGCTTCGATCTCTTGCAATTTCGCGCCGAGAGATCCTCGATGCCCTTCTAGAAGGCCGAGGCCTTAATCCCGATACCCTCGAAAAGCTTGTTAGAATTGCCCCAACCAAAGAAGAAGAAACCCAAATTCTCGAATTTGACGGCAACCCCACGAAACTTGCAGACGCCGAATCATTCCTCTACCACATTTTAAAATCTGTTCCTTCCCCATTTGCCCGTCTCGACGCCATGCTTTTCCGATCAAATTACGACCCAGATATCCTCCACCTCAAGAAATCATTACAAACTCTTGAATTAGGATGCAAGGAGCTAAGAACTCGTGGACTCTTCCTGAAACTTCTAGAAGCCATTCTCAAAGCCGGGAATCGGATGAACGCTGGAACAGCCAGAGGAAATGCACAAGCATTCAACTTAACTGCATTACGAAAGCTTTCCGACGTGAAAAGCACAGATGGAAAAACAACACTACTACATTTTGTTGTGGAAGAAGTAGTCCGGTCCGAGGGAAAACGTTGTGTGATAAACCGGAACCACAGCTTCGGTCGAACCAATAGCAGGAGCAGCACCAGCAGTAATTCGAATACCGACAGTGCAGGAAATTCAAAAGAAGAGAGAGAGAAGGAGTATATGATGCTTGGCTTACCCGTTGTCGGAGGTCTGAGTGTCGAGTTCTCCAACGTAAAGAAAGCAGCCACAATAGACCATGACGCCTTCGTTAACACATGCTCTACTCTAACAGCACGTGTCTCTGAAATTAGACAGCTCGTGGGGATGGCACGTGTCAATGCGGGAGATCAGTTTGTGAAGGAGATGAAAGGGTTCTTAGAAGAAGCAGAAGATGAACTGAAGGTAGTAAAAGAGGAACAAACAAGAGTGATGGAGAATGTGAAGAGAACAACAGAGTATTACCAAGCAGGAGCTTCTAAGGATAAAAATGTCAACCCGCTTCAACTATTTGTAATAGTCAAAGATTTTCTGAGAATGGTTGACCAAGTATGCGTTGACATTGCTCGGAATTTGCAGAAGAAGAGAACGGTGCAAGGAAAAGTGGGATCATCGTCACCCCCATCACCGGTAATGAGAGTTTCTGTGAGGTTTCCAAACTTGCCTGCACATTTCATGTCAGATAAATCTAGGACTTCTTCTTCTTCTTCTTCTAGTGATTCAGATGATGGTTTTTGA 2439 0.4719 MPAMFHPWLLLLLLLSLLFSRSSSQSSPPQNVETFFPLDSPPNSPSLPNSPSLPNSSNNPITPPTQIPAPPPPSSPSSNRSVGKAVAATAASTLVIAGVFFFFLQRFAIARRRRRNEKTDTVLRRETTVLPREEFKRFDGTLKGLIVDEDGLDVLYWRKLEGGHLKTSFHKEIISRPNEEDERRVRSRRESRDRHTKSEPIQEIPLLRGKSSSSSAQIRPELQEPHRITSALRESVAVAKPASPKPPLPAPPPPPPPPPPPPPPPAIPLKKNPAPPPPPPPIPVKKNPAPPPPPPKAGNGLASSLRPPPAPRVKSSGSRRAESSSVEKSTDIATAQTKMKPLHWDKVTAKADHSMVWDKISDGSFRFDDDLMEALFGYVATNRKSPERRNNTINQGTTNSGSPAQIFILDPRKSQNTAIVLRSLAISRREILDALLEGRGLNPDTLEKLVRIAPTKEEETQILEFDGNPTKLADAESFLYHILKSVPSPFARLDAMLFRSNYDPDILHLKKSLQTLELGCKELRTRGLFLKLLEAILKAGNRMNAGTARGNAQAFNLTALRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRCVINRNHSFGRTNSRSSTSSNSNTDSAGNSKEEREKEYMMLGLPVVGGLSVEFSNVKKAATIDHDAFVNTCSTLTARVSEIRQLVGMARVNAGDQFVKEMKGFLEEAEDELKVVKEEQTRVMENVKRTTEYYQAGASKDKNVNPLQLFVIVKDFLRMVDQVCVDIARNLQKKRTVQGKVGSSSPPSPVMRVSVRFPNLPAHFMSDKSRTSSSSSSSDSDDGF* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00846 812 PRINTS Proline rich extensin signature 61 73 - -
Eupl04g00846 812 PRINTS Proline rich extensin signature 270 282 - -
Eupl04g00846 812 PRINTS Proline rich extensin signature 25 41 - -
Eupl04g00846 812 PRINTS Proline rich extensin signature 237 262 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 176 201 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 596 617 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 790 812 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 176 336 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 793 812 - -
Eupl04g00846 812 Coils Coil 687 714 - -
Eupl04g00846 812 PANTHER FORMIN-RELATED 8 801 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Eupl04g00846 812 SUPERFAMILY Formin homology 2 domain (FH2 domain) 405 764 - -
Eupl04g00846 812 ProSiteProfiles Formin homology-2 (FH2) domain profile. 329 774 IPR015425 -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 242 298 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 30 81 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 317 336 - -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 595 624 - -
Eupl04g00846 812 Gene3D Formin, FH2 domain 349 769 IPR042201 -
Eupl04g00846 812 SMART it6_source 329 763 IPR015425 -
Eupl04g00846 812 MobiDBLite consensus disorder prediction 57 77 - -
Eupl04g00846 812 Pfam Formin Homology 2 Domain 334 749 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00846 Eupl-Chr4 12937833 12940846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00846 1 807 FH2 protein (formin) Gene Family AT1G70140 51.562 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00846 - - nnu:104607989 669.848