Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00845 ATGGCGAGAAACGGCGTGTTTTCCAGACGACAGAGGCCGGAGAAGGTTGAAGGTTTCGATGATCTTTCTCCAGTCGATTCTCAAGAACTCCATGTTCTTGCTGTAGATGATAGTCTTGTCGATCGGAAGGTCATTGAACAGTTGCTCAAGATCTCTTCTTGTAAAGTTACTGCAGTTGAGAGTGGAAGAAGAGCTTTGCAATTTCTTGGACTTGATGGAGAGAAGAACTCTGTTGGATTTGATGGTTTGAAGGTGAATCTGATTATCACAGATTACTGGATGCCTGGTATGACTGGATATGAGCTTCTCAAAAAGATCAAGGAATCTTCAACTTTCAGAGAGATACCAGTGGTGATCATGTCGTCAGAAAATGTCTTGGCTCGGATCAACAGGTGTTTGGAGGAAGGGGCGGAGGAATTTATAGTGAAGCCAGTGAAGTTGTCGGACGTGAAACGTTTGAAACATTACATAATGAGAGAAGAGGGAGAGGAAGATGAAGAGAGAGGGACCCACAAACGGAAGCTAGATGATACCAACGATGTATCTTTCTCATCACCTTCATCACCATCATCGCCATCATCGCCACCGTTGTCTCCATCATCATCACCAACGTTAAATTCTCCTTCGAGACGGCTTAGAACAACAATCAATGACAGTGATTGA 663 0.4389 MARNGVFSRRQRPEKVEGFDDLSPVDSQELHVLAVDDSLVDRKVIEQLLKISSCKVTAVESGRRALQFLGLDGEKNSVGFDGLKVNLIITDYWMPGMTGYELLKKIKESSTFREIPVVIMSSENVLARINRCLEEGAEEFIVKPVKLSDVKRLKHYIMREEGEEDEERGTHKRKLDDTNDVSFSSPSSPSSPSSPPLSPSSSPTLNSPSRRLRTTINDSD* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00845 220 MobiDBLite consensus disorder prediction 161 220 - -
Eupl04g00845 220 Gene3D - 30 188 - -
Eupl04g00845 220 SUPERFAMILY CheY-like 29 159 IPR011006 -
Eupl04g00845 220 SMART REC_2 30 157 IPR001789 GO:0000160
Eupl04g00845 220 CDD REC_typeA_ARR 32 153 - -
Eupl04g00845 220 MobiDBLite consensus disorder prediction 161 179 - -
Eupl04g00845 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 182 IPR045279 GO:0009736
Eupl04g00845 220 Pfam Response regulator receiver domain 32 150 IPR001789 GO:0000160
Eupl04g00845 220 ProSiteProfiles Response regulatory domain profile. 31 158 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00845 Eupl-Chr4 12925505 12926881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00845 12 181 Response Regulator Gene Family AT3G48100 66.860 3.72e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl04g00845 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00845 K14492 - nnu:104607988 273.478