Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00837 ATGGGGAGTTCGGAGGAGAAGGTAGTTGCTGTGATCATGGTAGGCGGGCCGACTAAAGGAACACGTTTTCGACCACTGTCGTTGAATATCCCGAAGCCCCTGTTCCCTTTGGCAGGACAGCCAATGGTTCATCATCCGATCTCAGCTTGCAAAAGGATCCCCAACTTGGTACAAATCTATCTCATTGGATTCTATGAGGAGCGGGAATTCGCATTGTATGTATCCTCAATCTCTAATGAGCTTAAAATCCCAGTCAGATACTTGAAAGAAGACAAGCCACTTGGTTCAGCTGGCGGGCTTTACAACTTCAGAGATCTGATTATGGAAGAGAACCCGACACACATCTTTTTGCTGAATTGTGATGTTTGCTGCAGTTTTCCGCTGCCAGACATGCTTGAGGCCCATAGAAGATATGGTGGGATGGGGACAATCTTAGTAATCAAGGTTTCTGCTGAAACAGCTAACCAATTTGGTGAATTGGTGGCTGATCCAATCACCAATGAATTGTTGCATTACACAGAGAAACCTGAGACTTTTGTGAGTGATCGAATAAACTGTGGTGTGTATATATTTACACCAGATATTTTTACTGCCATCCAGGATGTATCCTCGCAGCGGAAAGACAGAGCTAATCTGCGACGTGTATCCAGCTATGAAGCACTCCAGTCGGCTATAAAGACACTTCCTTCAGATTTTGTAAGGTTGGATCAAGATATCCTGTCACCTCTTGCCGGGAAGAAGCAGCTATATACATATGAGACACTAGACTTTTGGGAACAGATCAAAACTCCAGGAATGTCTTTGAAATGTTCTGATTTGTATCTTGCCCAATTCCGATTCACATCTCCCCATCTTCTGGCAAATGGAGATGGCACCAAGAGTGCTACCATTATTGGTGATGTTTATGTTCATCCATCAGCAAAAGTCCATCCAACTGCGAAGATTGGTCCTAATGTCTCAATTTCTGCAAATGCTCGTATAGGAGCTGGTGTTAGACTCATCAGTTGCATCATCCTAGATGATGTTGAGATTAAGGAAAATGCAATTATTATACATTCAATTGTTGGATGGAAGTCGTCTATCGGGAAATGGTCCCGTGTCCAGGCTGAGGGAGACTACAATGCGAAACTTGGGATTACCATCCTCGGAGAAGCTGTGACTGTTGAAGATGAAGTCGTGGTGGTTAACAGCATTGTTCTTCCAAATAAGACCCTCAATGTCAGTGTACAGGAGGAGATCATTCTATAA 1248 0.4375 MGSSEEKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLAGQPMVHHPISACKRIPNLVQIYLIGFYEEREFALYVSSISNELKIPVRYLKEDKPLGSAGGLYNFRDLIMEENPTHIFLLNCDVCCSFPLPDMLEAHRRYGGMGTILVIKVSAETANQFGELVADPITNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIQDVSSQRKDRANLRRVSSYEALQSAIKTLPSDFVRLDQDILSPLAGKKQLYTYETLDFWEQIKTPGMSLKCSDLYLAQFRFTSPHLLANGDGTKSATIIGDVYVHPSAKVHPTAKIGPNVSISANARIGAGVRLISCIILDDVEIKENAIIIHSIVGWKSSIGKWSRVQAEGDYNAKLGITILGEAVTVEDEVVVVNSIVLPNKTLNVSVQEEIIL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00837 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Eupl04g00837 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 8 357 IPR029044 -
Eupl04g00837 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Eupl04g00837 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Eupl04g00837 415 Gene3D Hexapeptide repeat proteins 287 412 - -
Eupl04g00837 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 415 - -
Eupl04g00837 415 Pfam Nucleotidyl transferase 10 207 IPR005835 GO:0009058
Eupl04g00837 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 277 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00837 Eupl-Chr4 12827489 12836875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00837 20 399 Eukaryotic Initiation Factors Gene Family AT2G34970 21.002 1.28e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00837 K00966 - ming:122078296 768.459