Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00835 ATGACTAGTGCTGCTCAATTGGTCAAGCCTGTTACATTGGAGCTTGGTGGAAAAAGTCCAATTCTTATATTTGAGGATGTGAACCTTGATAAAGCTGCTGAATGGGCTATATATGGTTGTTTCTTCACAAATGGCCAAATTTGTAGCGCAACATCTCGCCTTCTTGTTCATGAAAGTGTTGCAGAGGAATTCCTAGAAAAACTTGTTAAGTGGAGCAAAAGCATCAAGGTTTCAGATCCCTTCGAAGAAGGTTGCAGGCTTGGACCTATTGTTAGTGAAGGGCAGTACAAGAAGGTAATGAACTTTATTTCAACGGCTCAAACTGAAGGTGCAACCATTTTATGTGGTGGTGGCCGTCCCCAGAATTTAAATAAAGGGTTCTTCATCGAACCAACCATCATCACATATGTGGATACCTCCATGCATATTTGGAGGGAGGAGGTTTTTGGTCCTGTTTTATGTGTTAAAACATTTACCACTGAAGATGAAGCCGTTGAACTTGCAAATGACACCCATTATGGTTTAGGTGGTGCAGTGTTTTCTAAGGATCCACAAAGGTGCGAGCGTGTGACCAAGGCTCTTCAAGCTGGAATTGTGTGGGTGAACTGCTCGCAACCCTGCTTCTTCCAGACTCCTTGGGGAGGCATCAAATGTAGCGGTTTTGGTCGTGAACTAGGAGAATGGGGGCTTGACAACTACTTGAGCGTGAAGCAGGTGACGGAGTACATCTCTGATGACCCATGGGGGTGGTATCCATCCCCTTCAAAGAAGTAA 774 0.4444 MTSAAQLVKPVTLELGGKSPILIFEDVNLDKAAEWAIYGCFFTNGQICSATSRLLVHESVAEEFLEKLVKWSKSIKVSDPFEEGCRLGPIVSEGQYKKVMNFISTAQTEGATILCGGGRPQNLNKGFFIEPTIITYVDTSMHIWREEVFGPVLCVKTFTTEDEAVELANDTHYGLGGAVFSKDPQRCERVTKALQAGIVWVNCSQPCFFQTPWGGIKCSGFGRELGEWGLDNYLSVKQVTEYISDDPWGWYPSPSKK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00835 257 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 41 52 IPR016160 GO:0016491
Eupl04g00835 257 PANTHER ALDEHYDE DEHYDROGENASE 1 256 - -
Eupl04g00835 257 Pfam Aldehyde dehydrogenase family 2 239 IPR015590 GO:0016491
Eupl04g00835 257 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 237 IPR016162 GO:0016491
Eupl04g00835 257 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 21 212 IPR016163 GO:0016620
Eupl04g00835 257 FunFam Betaine aldehyde dehydrogenase 17 208 - -
Eupl04g00835 257 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 13 20 IPR029510 GO:0016491
Eupl04g00835 257 SUPERFAMILY ALDH-like 2 243 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00835 Eupl-Chr4 12801411 12804522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00835 1 255 Aldehyde Dehydrogenase Gene Family AT1G74920 77.255 2.01e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00835 K00130 - csin:114290711 458.759