Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00829 ATGTGTGCCCAGTCTTCTAGTGTGCTCGTTTTCTCACCCCTCTTTTGTTGGACTTGGGCAGATCCATTCGCTGAGGCAAATGCTGACGACTCTGGTGCTGGGTCAAAGGAGTATGTGCATGTGCGCGTACAGCAGCGAAATGGTAGGAAAAGCCTGACCACTGTACAGGGGTTGAAGAAAGAATTCAGCTACAACAAGATCTTGAAGGATCTAAAGAAGGAATTCTGCTGCAATGGTACCGTTGTCCAGGACCCAGAGCTGGGACAGGTTATTCAACTTCAAGGTGATCAGCGGAAGAATGTGTCCACTTTCCTTGTTCAGGCTGGCATTGTGAAGAAGGAGCAAATTAAGCTTCATGGTTTTTGA 366 0.4754 MCAQSSSVLVFSPLFCWTWADPFAEANADDSGAGSKEYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEQIKLHGF* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00829 121 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 20 121 - -
Eupl04g00829 121 Pfam Translation initiation factor SUI1 36 110 IPR001950 GO:0003743|GO:0006413
Eupl04g00829 121 SUPERFAMILY eIF1-like 5 121 IPR036877 GO:0003743|GO:0006413
Eupl04g00829 121 PIRSF Transl_init_SUI1_Euk 14 121 IPR005874 GO:0003743
Eupl04g00829 121 Gene3D - 5 121 - -
Eupl04g00829 121 ProSiteProfiles Translation initiation factor SUI1 family profile. 39 109 IPR001950 GO:0003743|GO:0006413
Eupl04g00829 121 CDD eIF1_SUI1 37 120 IPR005874 GO:0003743
Eupl04g00829 121 FunFam Eukaryotic translation initiation factor SUI1 14 121 - -
Eupl04g00829 121 NCBIfam translation initiation factor SUI1 19 121 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00829 Eupl-Chr4 12728288 12731376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00829 18 121 Eukaryotic Initiation Factors Gene Family AT1G54290 87.500 5.96e-66 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00829 K03113 - mof:131154552 201.83