Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00820 ATGGAAAAGGATGTGGTAGAACAAGGTGGTGCTGCCTCTGATCTCCTCTCTCCCAGATGGGAGGTAGATGATGACTTCAGCGTTAGAATCCACGTTGAAGAGAAGAAGCTCCGATTGTTTGGCTTCGAGGTGGATCCCTATACAAAGGATGGGAGGAGTTTGAGAGGGTCTGAAGAAGGAGATGAAAGTGTGAATTCCTCCAACACGGTCTTGTCTCGGAGGGAGAAACCTGTTAAAGAGAAAAGTCCAGTGAGCGAGGTAGAAGACAAGAAATACGAGTGCCAATTTTGTTTCAAGGAGTTTGCAAACTCGCAGGCATTGGGGGGTCATCAGAATGCCCATAAAAAGGAGAGGCTGAAGAAGAAAAGATTGCAGCTTCAGGCAAGGAAGACAAGCCTCAATCGTTACCTTCAACCTTTCCAGAGTCCCCATGGTGTCGGTTACTATGGCTCCCCTCCTTGGGTTTATGAACCTTACTCCTATGTTCCTGAGTTCACGCTGTATGAAGAGTCTCAGATTAGTTTCAACCCCTATGATCAAAATGCGTACCTAAAAGGGTCCCTTGCCTCGAACTCGTACTCTCTACCTCCTCATGTCCCAGTTCAACAAGATACTCGTAAGTTTAGCCTGATACAACCCCATGGGTCCCATTCCCATGAGAACAGACCTGTAGTCATTAAGCCTTCCCCCTTGCCTGTTCCCAAGCAAAGCTGTAAAAGTTTGGATCTTCAATTAGGCCTTACTATGCAGTCAAATATATGCAGTTCCTCTAGAAGAGGGGTATAA 786 0.4644 MEKDVVEQGGAASDLLSPRWEVDDDFSVRIHVEEKKLRLFGFEVDPYTKDGRSLRGSEEGDESVNSSNTVLSRREKPVKEKSPVSEVEDKKYECQFCFKEFANSQALGGHQNAHKKERLKKKRLQLQARKTSLNRYLQPFQSPHGVGYYGSPPWVYEPYSYVPEFTLYEESQISFNPYDQNAYLKGSLASNSYSLPPHVPVQQDTRKFSLIQPHGSHSHENRPVVIKPSPLPVPKQSCKSLDLQLGLTMQSNICSSSRRGV* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00820 261 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Eupl04g00820 261 Gene3D Classic Zinc Finger 65 141 - -
Eupl04g00820 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Eupl04g00820 261 MobiDBLite consensus disorder prediction 46 84 - -
Eupl04g00820 261 SUPERFAMILY beta-beta-alpha zinc fingers 88 119 IPR036236 -
Eupl04g00820 261 FunFam zinc finger protein 5 66 145 - -
Eupl04g00820 261 PANTHER ZINC FINGER PROTEIN 5 31 250 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00820 Eupl-Chr4 12589468 12590739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00820 25 136 C2H2 Transcription Factor Family AT1G68360 39.200 1.45e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00820 - - psom:113317055 335.109