Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00818 ATGCCGGCTAACGGCGTCTCTTCGAAATCAGAGAAGAATGAAGCCCCGAAGCAACAACAACGGAGAGATCCGTACGAGGTTCTTGGTGTTTCTCGGAACTCAACAGATCAGGAAATTAAGAGCGCATACCGAAAAATGGCTCTTAAGTATCATCCCGACAAAAATGCAAATGATCCTAAAGCAGCTGATATGTTTAAGGAGGTCACGTTTTCATATAATATTCTGTCTGATCCAGATAAACGACGTCAGTATGACACAGCTGGTTTTGAGGCTATTGAATCAGAAAGCCAAGAATTGGAGCTAGATCTTTCAAGTTTGGGAGCTGTGAACACCATGTTTGCTGCGCTTTTTAGTAAACTTGGTGTGCCCATAAAAACCACTGTCTCAGCAACTGTCTTGGAGGAAGCACTGAATGGAATTGTAACCATTCGTCCACTTCAGCTGGGACAACTTTTGTTTAAGAAGGTTGAGAAACAATGTGCTCACTTCTATTCTGTAACAATAACAGAACAGGAAGCACAAGCAGGGTTTGTTTGTCGAGTGCAATCACAGGACAAAAGCAAATTTAAGTTATTGTACTTTGAGCAGGAAGAGAATGGCGGATTAAGCCTTGCATTACAGGAGGACAGCACAAAAACAGGAAAGGTTACGTCTGCTGGGATGTATTTTCTTGGTTTCCCTGTTTACCGATTGGATCAAACAGTCAATTCGATGGCAGCTGCAAAGGATCCTGATGCTGCCTTCTTCAAAAAATTGGATGGATTTCAGCCATGTGAAATAACTGAACTAAAAGCAGGCACCCATGTATTTGCTGTTTATGGTGACAACTTTTTCAAAAGTGCAAACTACACAATAGAAGCTCTTTGTGCTGCACCATTTCCAGAAGAAAAGGAAAAGCTCAGGGCCGTGGAAGCTCAAATTTTAACTAAGAGGACGGAACTCTCTAAGTTCGAGACCGAGTACAGAGAGGTCCTGGCGCAATTCACAGAGATGACCAGTAGATATGCACAAGAAATGCAGGATATTGATGAGCTTCTTAAGCGAAGGAACACAATCCATGCCTCATACTCTACTGCTGTGCCCCTGAAGTGGAGTTCGAGTGGTAGCAAGATCAGAGGTTCCTACAAGGAGTCTAAAAAGGAAGAAGAGCGCCAAGCAAGATATAAGAAGCCTATGACGAGGGATAGGTCAAAGAAGAAGAAATGGTACAATATCCACTTGAAGGTGGACAAGACGAAGCCTTGCTGA 1248 0.4303 MPANGVSSKSEKNEAPKQQQRRDPYEVLGVSRNSTDQEIKSAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDTAGFEAIESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGIVTIRPLQLGQLLFKKVEKQCAHFYSVTITEQEAQAGFVCRVQSQDKSKFKLLYFEQEENGGLSLALQEDSTKTGKVTSAGMYFLGFPVYRLDQTVNSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSANYTIEALCAAPFPEEKEKLRAVEAQILTKRTELSKFETEYREVLAQFTEMTSRYAQEMQDIDELLKRRNTIHASYSTAVPLKWSSSGSKIRGSYKESKKEEERQARYKKPMTRDRSKKKKWYNIHLKVDKTKPC* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00818 415 SUPERFAMILY Chaperone J-domain 19 92 IPR036869 -
Eupl04g00818 415 ProSiteProfiles dnaJ domain profile. 23 88 IPR001623 -
Eupl04g00818 415 MobiDBLite consensus disorder prediction 366 399 - -
Eupl04g00818 415 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 8 413 - -
Eupl04g00818 415 MobiDBLite consensus disorder prediction 373 390 - -
Eupl04g00818 415 PRINTS DnaJ domain signature 43 58 IPR001623 -
Eupl04g00818 415 PRINTS DnaJ domain signature 60 80 IPR001623 -
Eupl04g00818 415 PRINTS DnaJ domain signature 80 99 IPR001623 -
Eupl04g00818 415 PRINTS DnaJ domain signature 25 43 IPR001623 -
Eupl04g00818 415 SMART dnaj_3 22 80 IPR001623 -
Eupl04g00818 415 Gene3D DnaJ domain 6 106 IPR036869 -
Eupl04g00818 415 FunFam Chaperone protein dnaJ 16 6 105 - -
Eupl04g00818 415 MobiDBLite consensus disorder prediction 1 33 - -
Eupl04g00818 415 Pfam DnaJ domain 23 85 IPR001623 -
Eupl04g00818 415 CDD DnaJ 23 77 IPR001623 -
Eupl04g00818 415 ProSitePatterns Nt-dnaJ domain signature. 65 84 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00818 Eupl-Chr4 12562926 12569316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00818 20 86 C2H2 Transcription Factor Family AT1G74250 41.667 4.03e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00818 - - nnu:104595757 722.62