Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00813 ATGAAGCGGCAACCTGAAGATGGCAAGGTAGGATCGGAGGGCAAAAGTCATGAGGAGAAGCGTCAAAAGGTTCCTGCTCTTAGAAATGTGGTACTGGAAGCGATAAAGATGGATGCCTTTCAAAAGTTCCTCTTTGCTCTGGAGCCCTTGATTCGTAGAGTCGTAAAAGAGGAAGTTGAAGTGGCATTAAGAAAGCATTTGGCGAGCATGAAGCAAAATTGCGGCAAACAGTTCCATTCTTCTACATCAAGAAGCTTACAACTACAATTCAGAAATAAACTTTCTCTTCCGGTTTTCACTGGCTCTAGAATTGATGGAGAGGAAGGTTCCATCATAAAAGTAGCTTTAGTAGATGCCCTGACCGGGCAAGTTGTCAACTCAGGTCCTGAATCCTCAGCAAAGGTGGAAATGGTAGTTCTAGAGGGAGATTTTGAAGGTGATGAAGAAGACAATTGGACACTTGAAGAATTTAAAAGTTATATTGTTAAAGAACGGGAAGGAAAGAGACCACTTCTTACAGGGGATGTATTTTTGGATCTTAATGAGGGCATTGGTGTGGTAGGTGAGCTGGCTTTTACAGATAATTCGAGCTGGACGAGGAGCCGTAAGTTCAGATTGGGAGCCAGAGTTGTTGATGATAACTGTGATGGAATTAGAGTAAGAGAAGCAAAGACTGAAGCTTTCATGGTCAAGGATCATCGTGGAGAATTGTACAAGAAGCACTATCCTCCATCTCTCGTCGATGAAGTATGGCGCCTAGAAAAAATTGGAAAAGACGGTGCTTTCCATAAGCGTCTGAGTAGTGAAAACATCAACACTGTGAAAGATTTTCTTACACTACTCTGTATAGACACTCAGAGGCTTCGAAATATCCTAGGCACGGGTATGTCTTCAAAGATGTGGGAAATCGCTGTGGACCATGCTAGGACGTGTGCACTTGATGACCAGATTTATGTGTACTATCCTCCCAATGCTCAGCAGAGAATGGGTGTGGTCTTCAACATTATTGGGAAAGCTTTGGGGATCCTTGCCGAACGGAAATTCACTCCCTTTGATGAGCTCTCAGAAACTGAAAAGGCTGATGCATACAAGCTGGTAAAAGTTGCATATGAACACTGGGAGGAAGTGGTCTCCTGCAATGATGGGGGCATTATGGACTGGTCGTCGCATTTGCCTGCTGTTTGTTGTCCTTCCAGCTCAACCGTGGCAGGGAGTTCCTACAGTAGTAATTTCCCAAGTTCTCACGCCAGTGGATTCAGTTTTACCCAACCAAATGCTTCATCTTCAGATATTGTTCCCTCCATATTAACCACTGGGGGCATGAGGAGCTTGGATAATTACACCTTGCAAAGTATTGACAACATGGATCTTGGATACGGCCATCCTTCCAGTTTCCAAAGCCAAGTCACCAATTCCCTAATCTGTGACATGGACTCCATGACCCCGTCTTTCTTCAGTGGAGACCATCTACAGTATTTTGATTCTGAGACTTCCCTTCAGTCTGAAAATCTCAGTTTGGAATCACAGGCAGACCTACGAACTGCTGTCAGTGGCTTCCTTGCCGTGTCAGCTCGGTCTGCTGCAGCTTCTGCCACCGATAAAGCTCAGACAAGATGGACAGTGCTATTCAGCGTGCTAAGATGGAGATTTTCAATAAGGAGGATTGTGGCTTCAAAAAAAAAGAGGGGGAAACGAAAAGTGGATAGATATGGTTAG 1716 0.4446 MKRQPEDGKVGSEGKSHEEKRQKVPALRNVVLEAIKMDAFQKFLFALEPLIRRVVKEEVEVALRKHLASMKQNCGKQFHSSTSRSLQLQFRNKLSLPVFTGSRIDGEEGSIIKVALVDALTGQVVNSGPESSAKVEMVVLEGDFEGDEEDNWTLEEFKSYIVKEREGKRPLLTGDVFLDLNEGIGVVGELAFTDNSSWTRSRKFRLGARVVDDNCDGIRVREAKTEAFMVKDHRGELYKKHYPPSLVDEVWRLEKIGKDGAFHKRLSSENINTVKDFLTLLCIDTQRLRNILGTGMSSKMWEIAVDHARTCALDDQIYVYYPPNAQQRMGVVFNIIGKALGILAERKFTPFDELSETEKADAYKLVKVAYEHWEEVVSCNDGGIMDWSSHLPAVCCPSSSTVAGSSYSSNFPSSHASGFSFTQPNASSSDIVPSILTTGGMRSLDNYTLQSIDNMDLGYGHPSSFQSQVTNSLICDMDSMTPSFFSGDHLQYFDSETSLQSENLSLESQADLRTAVSGFLAVSARSAAASATDKAQTRWTVLFSVLRWRFSIRRIVASKKKRGKRKVDRYG* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00813 571 Pfam Calmodulin binding protein central domain 246 311 IPR046830 -
Eupl04g00813 571 Pfam Calmodulin binding protein-like N-terminal domain 86 233 IPR046831 -
Eupl04g00813 571 Pfam Calmodulin binding protein C-terminal domain 316 378 IPR046829 -
Eupl04g00813 571 MobiDBLite consensus disorder prediction 1 22 - -
Eupl04g00813 571 PANTHER OS02G0177800 PROTEIN 15 451 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00813 Eupl-Chr4 12492846 12509317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00813 2 360 Calmodulin-binding Proteins AT5G62570 58.056 4.42e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00813 - - nnu:104607948 765.763