Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00810 ATGCAGGACATTTTCGGATCGGTCCGTCGATCTCTGGTTCTTCGTAGCAGCAGCTCCGCCAGAGATGAAGGTAGAGAAGGAAGCCTTGTTGAGAAGATTGGATCTTGTCTTCGTAAATCAAGTGTAGGGTTTCTCTCCAAAATGCAGAAGCCACCAACACTCGAACCCGAGAATGCCCCTCCGATTCGATGGCGTAAGGGCGAACTCATCGGATGCGGCGCATACGGTCGAGTCTACATGGGGATGAATCTCGATTCCGGTGAGCTTCTTGCTGTGAAAGAGGTTTCAATTGCGTCGAAAAGTTCTTCGAAGGGTAAAGCCCAAGCTCATATTCAGGAGCTCGAGGAAGAAGTCAAGCTTCTTAACAACCTCTCTCATCCGAACATAGTGAGATATCTGGGAACTGCAAGGGAGGAATACAGCTTGATTATTCTTTTGGAATTTGTTCCTGGGGGATCGATTTCGTCACTGCTTGAGAAATTCGGCTCATTCCCTGAGGCTGTCATTAAAACGTACACGAAACAGTTATTGAAGGGGCTGGAGTATCTCCATCAGAATGGAATCATACATAGGGACATTAAGGGGGCAAACATCCTAGTTGATAACAGAGGCTGCATCAAGCTTGCTGACTTTGGTGCATCAAAGCAAGTTGTCGAACTGGCAACTGTATCGGGTGCCAAATCAATGAAGGGTACTCCATATTGGATGGCTCCGGAAGTTATTCTCCAGACTGGTCATAGCTTCTCTGCTGATATATGGAGCGTCGGATGTACTGTTATAGAGATGGCTACTGGAAAACCTCCTTGGAGCCAATACAAAGAGGTTGCTGTTCTATTGCATATCGGGACGACAAAATCGCATCCACCCATCCCTGAGCATCTTTCTTTGGAGGCAAAGGATTTTCTTTTAAAATGTTTAGAGAAGGAACCCAACTTGCGGCCATCTGCTTCAGACTTGCTTCAGCATCCCTTTGTTAAAGGAGAATATCAGGATCCTTGTTCAATATTTCCTTCTCCTAATATGGAACATTCTGCAACCTTGTCTTCTGCGCCTGGGTCATACCTTAAGAACACGCGTTTGAAGAATGACTGTAACATCAGTAGCCTGAGATGCTCAACTATGCATCCAGAGGAACTCTCAAGGCCAGAGCTCACTTGGGAAACAAGTAAAAGTGATGATATGTGTCAGATTGGCATCAACGATGATCTTGAGGTTGAGGGAATAGTAAGATCAGATTCTGCTTTAATGCCAGATCCATTTAGTAAGAGTTTTAATCCCATGTCTGAGCCCTTTGATTGGCAATGCAAGTTTCACGAATCTCCAGAGCAGATAAGAATGAACTTGGAGGACTCTGGTGCATCAGTTAATGGTATTGCCAGCAGCCCTGGAGTATCTGCCGAAGCAGGGGATGATTTCACAATTCCTTGTAGGACTCCAGTCTGTGGGGATGATGATGATGAAGTTACAGAGTTCAAAATTAGAGCGTTTTTGGATGAGAAAGCTCTGGAGCTGAAGAAGCTGCAGACACCACTATATGAAGAGTTCTACAACACCTCCAATGCCTCTGCTCTTCCAGGTGAAGCTGGGACAGTATATAAAGAAGATGTTACAAATGCTTTTAAGTTGTCTCATAGAAGCAAGTCACCAGACTCACCATGCAGTAGGGAAGATAGTGGATCATCAGCCTCACTGGTTGATACTGAGAAACCCTTGAGCTGCAGCAGCAGCATTGACGATCAAGTCTTGATAGAACCAAATAGCCCAAGTACGACTTGTTCTGAGAGGCAGAGGAAGTGGAAAGAAGAGCTGGACCAAGAGCTTGAGAGACAACGGAAGATGATGCGCCAGGCTAGTGTTGGCAGGAAAACATATTCTCCAAAGGATAGAGGTTTGAAACGGCCGAGGCCCCAATCACGTTTTGCATCCCCAGGAAAATGA 1938 0.4567 MQDIFGSVRRSLVLRSSSSARDEGREGSLVEKIGSCLRKSSVGFLSKMQKPPTLEPENAPPIRWRKGELIGCGAYGRVYMGMNLDSGELLAVKEVSIASKSSSKGKAQAHIQELEEEVKLLNNLSHPNIVRYLGTAREEYSLIILLEFVPGGSISSLLEKFGSFPEAVIKTYTKQLLKGLEYLHQNGIIHRDIKGANILVDNRGCIKLADFGASKQVVELATVSGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQYKEVAVLLHIGTTKSHPPIPEHLSLEAKDFLLKCLEKEPNLRPSASDLLQHPFVKGEYQDPCSIFPSPNMEHSATLSSAPGSYLKNTRLKNDCNISSLRCSTMHPEELSRPELTWETSKSDDMCQIGINDDLEVEGIVRSDSALMPDPFSKSFNPMSEPFDWQCKFHESPEQIRMNLEDSGASVNGIASSPGVSAEAGDDFTIPCRTPVCGDDDDEVTEFKIRAFLDEKALELKKLQTPLYEEFYNTSNASALPGEAGTVYKEDVTNAFKLSHRSKSPDSPCSREDSGSSASLVDTEKPLSCSSSIDDQVLIEPNSPSTTCSERQRKWKEELDQELERQRKMMRQASVGRKTYSPKDRGLKRPRPQSRFASPGK* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00810 645 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 49 330 - -
Eupl04g00810 645 MobiDBLite consensus disorder prediction 604 645 - -
Eupl04g00810 645 ProSiteProfiles Protein kinase domain profile. 64 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00810 645 FunFam Mitogen-activated protein kinase kinase kinase 2 63 352 - -
Eupl04g00810 645 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Eupl04g00810 645 SUPERFAMILY Protein kinase-like (PK-like) 63 357 IPR011009 -
Eupl04g00810 645 Gene3D Transferase(Phosphotransferase) domain 1 63 351 - -
Eupl04g00810 645 Coils Coil 600 620 - -
Eupl04g00810 645 CDD STKc_MAPKKK 63 325 - -
Eupl04g00810 645 SMART serkin_6 64 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00810 645 Coils Coil 104 124 - -
Eupl04g00810 645 MobiDBLite consensus disorder prediction 543 571 - -
Eupl04g00810 645 Pfam Protein kinase domain 65 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00810 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00810 Eupl-Chr4 12464006 12469249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00810 1 645 MAP Kinase Kinase Kinase AT1G54960 53.519 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl04g00810 Pkinase 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00810 K20606 - ming:122090466 765.763