Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00800 ATGTCTCTCTCTTGCTCTGATTGCTTCTCCGATCTTCTCTGCGGTGAGGACGCCGGAATCTTGTCCGATGACTTTCTTGAATGCTCTCCCGATCTTGAACTTCCGGCAGATGTCGAGGAGTCGGTGGCCGGATTCGTCGAAGACGAAGGAGAGTACATGCCGGGATTTGATTATCCCGCGATGTTTCAGTCTCAATCGCTTGACGCTTCAGCTCGACAGGACTCCGTTGCATGGATTCTCAAGGTGCATGCGTTCTACCGTTTCCAGCCATTAACGGCGTATCTTTCCGTTAACTACTTGGATCGGTTCCTCTCTTCTCGTCGTTTGCCGCAAACAAATGGGTGGCCATTACAACTCTTATCTGTTGCTTGCTTGTCCTTGGCTGCTAAGATGGAGGAAACCCTAGTTCCTTCTCTTTTGGATATTCAGGCCGAAGGTGCGAAATTCATTTTTGAACCAAGAACGATCCGGAGAATGGAGCTCCTTGTCCTAAGTACCTTGGACTGGAGACTACGTTCCATAACACCCTTCAACTTCATTGATTTCTTTGCGTGCAAAGTAGATTCAACTGGGACATTTATAGGGTTCCTTGTTTCACGAGCGACACGAATAATTTTAACTATCATAAGAGAGACTGATTTCCTACACTACTGGCCTTCATCAATGGCGGCAGCAGCCATACTTTGTGCAGCTGATGATATCCCGAATCTATCTCTTGTTAACCCTGAAAATGCTGTATCGTGGTGTGACGGACTAAGCAAAGATAGAATTGTCAATTGCTACAAGCTTATGCGAGAAATTGTGATTGACAATAGCCAGAAAAAGCCCCCCAAAGTTCTACCACAGCTCAGAGTAACAACTTGGACCAGAATTAGTAGTTCTGGTGACTCATCTTCCTCTTCTTCTTCCTCCCCTAATAAAAGGAGGAAACTAAACAACTCATTGTGGGTAGATGATGACAAAAACAAACTCTGA 975 0.4554 MSLSCSDCFSDLLCGEDAGILSDDFLECSPDLELPADVEESVAGFVEDEGEYMPGFDYPAMFQSQSLDASARQDSVAWILKVHAFYRFQPLTAYLSVNYLDRFLSSRRLPQTNGWPLQLLSVACLSLAAKMEETLVPSLLDIQAEGAKFIFEPRTIRRMELLVLSTLDWRLRSITPFNFIDFFACKVDSTGTFIGFLVSRATRIILTIIRETDFLHYWPSSMAAAAILCAADDIPNLSLVNPENAVSWCDGLSKDRIVNCYKLMREIVIDNSQKKPPKVLPQLRVTTWTRISSSGDSSSSSSSSPNKRRKLNNSLWVDDDKNKL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00800 324 Gene3D - 46 262 - -
Eupl04g00800 324 Pfam Cyclin, N-terminal domain 46 171 IPR006671 -
Eupl04g00800 324 SMART cyclin_7 77 165 IPR013763 -
Eupl04g00800 324 SUPERFAMILY Cyclin-like 156 269 IPR036915 -
Eupl04g00800 324 MobiDBLite consensus disorder prediction 291 311 - -
Eupl04g00800 324 Gene3D - 55 172 - -
Eupl04g00800 324 SMART Cyclin_C_2 174 305 IPR004367 -
Eupl04g00800 324 FunFam D2/4-type cyclin 55 172 - -
Eupl04g00800 324 MobiDBLite consensus disorder prediction 291 324 - -
Eupl04g00800 324 CDD CYCLIN_AtCycD-like_rpt1 71 169 - -
Eupl04g00800 324 SUPERFAMILY Cyclin-like 36 171 IPR036915 -
Eupl04g00800 324 ProSitePatterns Cyclins signature. 72 103 IPR006671 -
Eupl04g00800 324 Pfam Cyclin, C-terminal domain 174 286 IPR004367 -
Eupl04g00800 324 CDD CYCLIN_AtCycD-like_rpt2 174 264 - -
Eupl04g00800 324 PANTHER CYCLINS 52 272 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00800 Eupl-Chr4 12366482 12369213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00800 1 322 Core Cell Cycle Gene Families AT1G70210 59.639 4.03e-130 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00800 K18810 - zju:107419860 465.692