Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00794 ATGCATGGGCGGGAAGGTGAGGAGAGGAAACGGAGGCGGCACATGTGGTCGGTCCCCGCCCTCGGTACGATTGTAGCTTCCCCTGATTCTACGACGACCACTACCGCTAATTCCTTCTGCAAGGATGGACGCAAGATTAGTGTTGGTGACTGCGCCCTCTTCAAGCCCCCCCAGGACATGCCTTGTCCACCTTTCATTGGAATAATTCGCTGGTTGACGTCGGGCAAAGAGGACCATCTAAAGTTAGGTGTGAACCGGCTTTACCGACCTGCTGACGTAAAGCTTGGCAAAGGCAACTTACTGGACGCTGCACCAAACGAAGTTTTCTATTCCTTTCACAAGGATGAGATACCTGCTGCATCGTTACTCCATCCGTGTAAAGTCGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCTCATTTGTGTGCAGGCGAGTGTATGACAGTACAAAAAAGCGTTTATGGTGGCTAACTGAGCAAGATTGCATCAATGAGCGACAGGAAGAAGTAGATCAGCTACTAGAGAAAACACAACTAGAAATGCATGCAGCACTGCAGTCAGGAGGGCGTTCTCCAAAACCATTGAATGGTCCGACAACAACACCACAGTTAAAGCTTGGTTCAGATAGTGTACAGAATAGTGCCACCTCATTTTCTTCCCAAGTTAAGGGAAAGAAGAGGGAGCGTGGTGATCAGGGCTCCGAGCCCATAAAACGAGAGCGTTCTTCAAAGACAGATGATGGAGATTCTGGTCATTTTAGACCAGAAATCATGCTAAAATCTGAGATTGCCAAAATAACAGACAAAGGAGGGCTTGTAGACTACGAAGCGGTTGATAAGCTGGTGCAACTCATGCAGCCTGATAGAGCTGAGAAGAAAGTGGACTTGGCTGGACGAATAATGCTTGCAGATGTGATAGCAGCCACAGATAAGGTTGAATGCCTCGGGCAGTTTGTGCACCTCAGGGGTCTGTCTGTATTGGATGAGTGGCTCCAGGAGGTGCATAAAGGGAAGATTGGTGATAGTAGTAGCCCCAAGGAAAGTGACAAATCTGTTGAGGAATTCCTCTTGGCTTTGCTTCGTGCACTTGATAAGTTGCCTGTAAATCTTCAGGCCCTGCAGGGTTGTAATGTTGGCAAGTCAGTGAATAATTTGCGTAGTCATAAGAACTGGGAAATCCAGAAGAAAGCTAGGAGTTTAGTTGACACATGGAAGAAACGTGTTGAAGTGGAAATGAAGATGATTGATGCAAAGTCTGGGTCGAGCCCGGATGTTTCATGGTCTACCAAGCCAGGTTTTTCTGAAGTTCCTCATGTAGGAAATAGACGTACAGGAGGATCTTCTGAGGTGTCTGTGAAGAGCTCCACTACACAGCCTTCTGCATCTAAAACAGCACCAGTTAAGCTTGGCCATGGAGATGGTGTTGCCAAGTCGACATCAGCATCTCCGGGATCTATGAAGTTATCGGCATCGTTGATTGGAGCAGTGGCTGTTAGCTCAAAGGATTCACATTGCAAAATGACAGTTAGCGGTGGCACCTCAGATCTGCCTCTAACAACAATAAAGGAGGAGAAGAGCAGCAGTTCTAGTCAATCTCAGAACAATAGCCAGTCATGTTCAAGTGATCATGCCAAGACTGTGGGTACTGCATGGAAGGAGGATGCGAGGAGCTCCACTGCTGGGTCGATGAATGTGAATAAGACATCTAGCGGTGCTTCTCGCCATCGGAAATCAAGCAACGGTTTTGTGGGGTCTGCTGTTTCTGGGTTGCAAAAGGAAACTGCTTTGGGTAAAGCCAATTCCTTGAACCGGAATGTCACATCTGAAAAAATATCCCAATCTGGATTTACATGCGAAAGAACGCTTGATATGTCCGCAGTCGATCATGGAAACAGTCACAGACTGATTGTTAGGCTTCCAAATCCTGGCCGCAGTGCCAGTGGAGCTTCTTTTGATGACCCTTCTGTCATGGTTAGCAGAGCTTCTTCTCCTGGACTTTCTGAGAAGCCTGATCACTGTGATCGGAAAATAAAGGGAAGAAATGATTCTTGTCGACCTAACATTGCATCAGATGTGAATGCTGAATCATGGCAGAGCAATGATGTGAAAGATGGATTGGCTGGATCTGATGAAGGTGATGGGTCAGCTGCTGCTGTTGTTGACGAAGAACATTGCAGGAATGGCAACGAGATTGGAAAACGAATGGAATCATCAAAAGCTACCTGTTCATCATCAGGAAATGACAAGGGGGTTATCATGAGTGAACCCAAGACAGGGAAATCATACAATGATTCTTTAAGCTCCATTACTGCTTTGATTGAAAGCTGTGTAAAGTATTCTGAAGCAAGTGAGCGTATGTCAGTTGGAGATGATATTGGAATGAATCTGCTTGCCAGTGTGGCTGCTGGAGAAATGTCCAATTCTGACTTGATTTCACCAATTGGTTCTCCTGGGAGGAACTCCCCTGTACCAGAGGATTCTCATACGGTCAATGATGCAAAGTCAAAATTATCACTTGAAGATGTTGCGGCTCGAAGCCAATGCCAATCTGATGATGGTGCTGAGAGTGACACTGAGAAGCAGGGTAATATTGTTGGTCCTTCGCGAGTTAAGGATGGATTACAGCATATTGCTGCACATGCATCAACCGATTTTTTGGGAGACAGCAAAATCACTTCATCCTTCTCTGAAGAGAAACCAACAGGGGAGCGTAGTGAACAATTTCATGATTCTAGTTTGGATTTGCAACAAACTGCAGGTCCATGCTCAAAGTCTGATGGAAAACCATGTGAAACGAATCCTGCGGTTTCTGTGGCTGTTTCCTCTGCAGACACGAGAGGAGAGAGTGCAGAGGTTGAAGGAGTGAAACAGCTTCGTGAGAAAAGGAAGACAGGTGTTACTGGCTCGAATGGTGATGGTGTCCAAGACTTCAAAACAAAGGTAAAGGCCCCCTTGTCTGACAAAAATAAGGTTGACCAGGCAGATGAAAAGATTGTGGAGAATAGTATGACAGTCGCATCCGACGTTGTTCGTGCTTCCGTGGGTGATGAATGTGGGATTGACAATGCAGATTCAAGTGTAAAAGTTGAGAAGGAAGTTGTTGAAGAATCACCATCCTGCACATATTTGGAAATGGGTGGTGAGAACAACCACCCTGTGCATGAAGGGTTGAGTGCTGGTACCTCAACAGAGCAGAAGCTACCTCCTGCCGCTGTTAATCGCACCGAGGCTGAAAGTGGCGAGGATGTGGTGCTTCCTTCTGGTTCTGGTAATGTTGTGAATCCAGACAGTGGTGATTTGTTTATGTCTGAGAAGGCTGATAGTGTGGAGGCAAGGACTCATGTTGAGCAGATTGAGAATAAAAAAATGGAGCAGGCAAGTAATGATCCTCCAACTCTTGCTGAGCGAGTTGGAGCTGGTGAAGGTTTAGTTGTTTCAGATCACAATAATGAAGGTGTTGAATCTGAATCAGAAAGAAGAGAGGTCCTTGAGCACCATTCTGGTGGAACAGTTCTCCATGAAGAGTCATCCAAAATTCCTGTGCAAGAAACCGAGCGTGTGAAGTCTTCTGGATCTAAGTCTTCTGGTGTTGAAGCAGATGAGACCGAGGAGTGTGCTTCCACTGCTGAAACTTCTTCTTTGTCTGTTGCAGCAGGGTCAGATATAGTTGCAAAACTGGACTTTGATTTGAATGAAGGCTTCCCTGTGGATGAAGGGAACCAAGGTGAGCCAGTTACTTCGGCAGCACCAGGATGTTCATCTTCTGTTCATCTGCCTAGTCTGTTGCCATTTCCTGTTTCTTCTATGTCTAGCAGTCTGCCTGCTTCGATCACAGTGGCTGCTGCTGCAAAAGGGCCTTTTGTTCCTCCTGAGAACCTATTGAAGAGTAAAGGGGAACTTGGATGGAAAGGATCAGCTGCTACCAGCGCATTCCGACCGGCTGAACCTAGAAAGGTTCTGGAGATGCCACTTAATTCGACTGATATCCCTCCTGATAACAATGCCCGCAAGCAGGTCCGCCATCCATTGAATATCGATCTGAACATGCCAGATGAGAGAGTTCTTGAGGACATGGCTACTCAGAACTCTGCTCAGGGTACAGGTTCTGAATCTGGCCACTTTAGTAATCGTGAATTGGGGCGCAGTGAGATGTTCGGTTCTGCCCCCGAGCCAGTTCGTAGTGCTGGAGGACTGGATCTTGATTTGAACAGAGTTGATGAAAGTACTGACATTGGGCAGTTCTCAGCAAGCACCAGTCGTAGATTGGAAGTGCCTCTTTTGCCAGTTCGGTCATCATCATCTGGTGGATTTTCTAATGGAGAGGTGAATGTCCTGAGGGACTTTGATCTGAACAATGGACCAGGCCTTGATGATGTGGGCACTGATCCAGCACCGCGCAGCCAGCATGCGAAGAGCAGTGTGCCGTTCCTGCCGCCTGTTGCTGGTCTCAGAATGAACAATGCAGAACTGGGTAGTCTGTCCTCGTGGTTTCCTCCTGGGAACTCCTATCCAGCCGTTGCCATCCCGTCAATCTTGCCCGACAGGGGGGAACAGCCTTACCCAATTGTTGCAACATCCGGTATGCAGAGGATCTTAGGACCACCTACCAGTGGCTCCACCTTCGGTCCTGATGTCTATAGGGGGCCAGTGCTATCGTCCTCACCTGCAGTGGCCTTTTCTCCTGCTTCCCCATTTTCATATCATGGGTTTCCTTTTGGCAGCAGTTTCCCCCTTCCTTCGACCTCCTTTTCAGGTGGATCAACAACGTATATGGATTCTTCATCCGGTGGTGGCCTTTGCTTCCCTCCAGTTCCTTCGCAGGTAGTAGGACCTGCTGGTGCAGTTTCATCCCATTACCCAAGGCCCTATGTCATAAGTCTTCCTGATGGTTCAACTAATGGTGGGGCTGAGAGCAGTAGGAAGTGGGGAAGGCAGGGTCTAGATCTTAATGCAGGTCCAGGAGGTACGGATATAGAAGGTAGAGATGAGAGGTTGCCTTCAGCATCGAGGCAACTCTTGGTTGCCAGTTCTCAGGCCTTAGCGGAGGAGCAAGCAAGAATGTTCCAGGTGTCAGCCGGATTATTGAAGAGGAAGGAGCCCGAAGGAGGGTGGGATGCAGAGAGGTATAGCTACAAACAACCTTCATGGCAGTAG 5163 0.4763 MHGREGEERKRRRHMWSVPALGTIVASPDSTTTTTANSFCKDGRKISVGDCALFKPPQDMPCPPFIGIIRWLTSGKEDHLKLGVNRLYRPADVKLGKGNLLDAAPNEVFYSFHKDEIPAASLLHPCKVAFLRKGVELPSGISSFVCRRVYDSTKKRLWWLTEQDCINERQEEVDQLLEKTQLEMHAALQSGGRSPKPLNGPTTTPQLKLGSDSVQNSATSFSSQVKGKKRERGDQGSEPIKRERSSKTDDGDSGHFRPEIMLKSEIAKITDKGGLVDYEAVDKLVQLMQPDRAEKKVDLAGRIMLADVIAATDKVECLGQFVHLRGLSVLDEWLQEVHKGKIGDSSSPKESDKSVEEFLLALLRALDKLPVNLQALQGCNVGKSVNNLRSHKNWEIQKKARSLVDTWKKRVEVEMKMIDAKSGSSPDVSWSTKPGFSEVPHVGNRRTGGSSEVSVKSSTTQPSASKTAPVKLGHGDGVAKSTSASPGSMKLSASLIGAVAVSSKDSHCKMTVSGGTSDLPLTTIKEEKSSSSSQSQNNSQSCSSDHAKTVGTAWKEDARSSTAGSMNVNKTSSGASRHRKSSNGFVGSAVSGLQKETALGKANSLNRNVTSEKISQSGFTCERTLDMSAVDHGNSHRLIVRLPNPGRSASGASFDDPSVMVSRASSPGLSEKPDHCDRKIKGRNDSCRPNIASDVNAESWQSNDVKDGLAGSDEGDGSAAAVVDEEHCRNGNEIGKRMESSKATCSSSGNDKGVIMSEPKTGKSYNDSLSSITALIESCVKYSEASERMSVGDDIGMNLLASVAAGEMSNSDLISPIGSPGRNSPVPEDSHTVNDAKSKLSLEDVAARSQCQSDDGAESDTEKQGNIVGPSRVKDGLQHIAAHASTDFLGDSKITSSFSEEKPTGERSEQFHDSSLDLQQTAGPCSKSDGKPCETNPAVSVAVSSADTRGESAEVEGVKQLREKRKTGVTGSNGDGVQDFKTKVKAPLSDKNKVDQADEKIVENSMTVASDVVRASVGDECGIDNADSSVKVEKEVVEESPSCTYLEMGGENNHPVHEGLSAGTSTEQKLPPAAVNRTEAESGEDVVLPSGSGNVVNPDSGDLFMSEKADSVEARTHVEQIENKKMEQASNDPPTLAERVGAGEGLVVSDHNNEGVESESERREVLEHHSGGTVLHEESSKIPVQETERVKSSGSKSSGVEADETEECASTAETSSLSVAAGSDIVAKLDFDLNEGFPVDEGNQGEPVTSAAPGCSSSVHLPSLLPFPVSSMSSSLPASITVAAAAKGPFVPPENLLKSKGELGWKGSAATSAFRPAEPRKVLEMPLNSTDIPPDNNARKQVRHPLNIDLNMPDERVLEDMATQNSAQGTGSESGHFSNRELGRSEMFGSAPEPVRSAGGLDLDLNRVDESTDIGQFSASTSRRLEVPLLPVRSSSSGGFSNGEVNVLRDFDLNNGPGLDDVGTDPAPRSQHAKSSVPFLPPVAGLRMNNAELGSLSSWFPPGNSYPAVAIPSILPDRGEQPYPIVATSGMQRILGPPTSGSTFGPDVYRGPVLSSSPAVAFSPASPFSYHGFPFGSSFPLPSTSFSGGSTTYMDSSSGGGLCFPPVPSQVVGPAGAVSSHYPRPYVISLPDGSTNGGAESSRKWGRQGLDLNAGPGGTDIEGRDERLPSASRQLLVASSQALAEEQARMFQVSAGLLKRKEPEGGWDAERYSYKQPSWQ* 1721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 1236 1255 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 555 588 - -
Eupl04g00794 1720 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1720 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 195 224 - -
Eupl04g00794 1720 Pfam TFIIS helical bundle-like domain 362 411 IPR017923 -
Eupl04g00794 1720 CDD TFIIS_I 336 412 - -
Eupl04g00794 1720 SMART TFS2_5 334 413 IPR003617 GO:0005634
Eupl04g00794 1720 SMART BAH_4 44 161 IPR001025 GO:0003682
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 1150 1216 - -
Eupl04g00794 1720 Pfam BAH domain 45 157 IPR001025 GO:0003682
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 1045 1103 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 1058 1072 - -
Eupl04g00794 1720 ProSiteProfiles TFIIS N-terminal domain profile. 328 414 IPR017923 -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 225 257 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 670 685 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 737 766 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 952 969 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 506 548 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 421 488 - -
Eupl04g00794 1720 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 316 421 IPR035441 -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 506 588 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 812 997 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 187 257 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 1456 1478 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 643 719 - -
Eupl04g00794 1720 Gene3D - 30 255 IPR043151 -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 447 467 - -
Eupl04g00794 1720 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 278 414 IPR035441 -
Eupl04g00794 1720 ProSiteProfiles BAH domain profile. 44 161 IPR001025 GO:0003682
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 1634 1667 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 1154 1185 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 737 754 - -
Eupl04g00794 1720 MobiDBLite consensus disorder prediction 689 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00794 Eupl-Chr4 12228012 12236010 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Eupl04g00794 BAH 1.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00794 - - ming:122077207 2225.28