Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00782 ATGGATGTATGGTCATGGGCTGGAGATGCAGTTCCTTTTGCAGCCATGGTGATGGCGGAATGTGCCCATGTGGGTATGACCACGGTAAGCAAAGCAGCCATGTCCAGAGGGATGAGCATCTTCGTCTTTATTGTGTATTCGAATGGACTTGCCACCCTCATCCTCCTTCCTTGTTTAATCTTTCACAGAACAAATCGTCCTCCACTCACTTTCTCCTTGCTCTGTAGATTCTTCCTCCTTAGCTTAATTGGGATTTGTGGAGCACAAACCCTTGGATTTACTGGTATTCGCTACAGCTCTCCCACTCTTGGTTCTGCACTGGGCAATATCACCCCAGCTTTTACCTTCATACTTGCTATCATTTTCAGAATGGAAAAGCTGGATTTGAGAAGCTCAAGCAGTCAATTCAAAACACTGGGGGTGATAGTATCAATCACAGGGGCATGCGTAGTGACTCTCTACAAGGGTCCAACAATCATGACGACTGCATCACCTCATCAGCTTGTTCTAGCACCACAATCAAATTGGATCATTGGAGGCCTTTTCATTTCATCTGCTTGTTTGTTGGTTGCAGTGTGGAACATCCTTCTGGCAGCAACTGTTAAGGAGTACCCCGCAGAGCTGAGCATTGTATTTTTCTATTGCTTCTTTGGGACCATCCAATGTGCACTACTATCTTTAATTGCAGAAAGAGACCCAAGTGCTTGGAGATTAAAGCCTGATACGGAGTTGATTGCCGTTGTCTATACAGCAGTTCTTGGGTTTGTAGTCACTATAAGCATTCATACATGGTGCATGCGCAAGAAGGGGCCTATCTATGTGTCCATGTTCAAGCCCTTGGGGATTGCCATTGCAGCTGTCATGGGTGTCATTTTCCTTGGTGACACTCTCCATATCGGAAGTTTGATTGGATCAATTATTATAGCCGTTGGGTTTTATTCTGTGATTTGGGGGAAATCGAAAGAAGAGAAAATAAGTGAAGGCAATGAAGTTAGTAGCTTGGAATCATCCACTCATAAGGCCCCTCTCCTGCAAAGCGAAAAGGAAGAAATATAG 1056 0.447 MDVWSWAGDAVPFAAMVMAECAHVGMTTVSKAAMSRGMSIFVFIVYSNGLATLILLPCLIFHRTNRPPLTFSLLCRFFLLSLIGICGAQTLGFTGIRYSSPTLGSALGNITPAFTFILAIIFRMEKLDLRSSSSQFKTLGVIVSITGACVVTLYKGPTIMTTASPHQLVLAPQSNWIIGGLFISSACLLVAVWNILLAATVKEYPAELSIVFFYCFFGTIQCALLSLIAERDPSAWRLKPDTELIAVVYTAVLGFVVTISIHTWCMRKKGPIYVSMFKPLGIAIAAVMGVIFLGDTLHIGSLIGSIIIAVGFYSVIWGKSKEEKISEGNEVSSLESSTHKAPLLQSEKEEI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00782 351 Pfam EamA-like transporter family 178 316 IPR000620 GO:0016020
Eupl04g00782 351 Pfam EamA-like transporter family 16 152 IPR000620 GO:0016020
Eupl04g00782 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 321 - -
Eupl04g00782 351 PANTHER WAT1-RELATED PROTEIN 9 332 IPR030184 GO:0016020|GO:0022857
Eupl04g00782 351 MobiDBLite consensus disorder prediction 328 351 - -
Eupl04g00782 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00782 Eupl-Chr4 12074070 12078341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00782 9 334 Nodulin-like Gene Family AT5G40240 49.263 3.13e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00782 - - cave:132175067 416.772