Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00780 ATGGGGTTGTCTTTATGGGATTCAGTAGGTCTTGCAGCCATGGTGGTGGTAGAGTGCATCATCGTAGGGCAAACCACAGTAAGCAAAGCTGCAATGTCTCGAGGGATGAGCCCTTTGATCTTCACCTTCTACTCATATGGTTTCGCCACTCTCATCCTCCTCCCATCTTCCTTCCTCTTTCACAGTTATGTTGGGCGGACTTTGTTATATGTAGGTATCCGCTACAGCTCTCCCACTCTTGCATCGGCAATGAACAATCTCATCCCTGCCTTTACTTTCATTTTTGCCATCATTTTCAGCTTACAGTTTATTGTTTTCAACTTGGTATTGCAGGTATCAATTATGAAGGAGTATCCAGCAGAGCTGAGCGTAGTCTTCCTCTATTGCTTCTTCGCGACCATTATATCTGCAGTAGTCACTTTGATCGCAGAAAGAGACGCGAGTTCTTGGAGATTAAGACCTGATATTGAGTTGATTGCTATTCTATCCTCATGTGGTTGGATCAATCATAATATCTCTTGGGTTTTATGGTGTGATGTGGGGAAAAGTCAAAGAAGAGAAGATGGGTGA 570 0.4368 MGLSLWDSVGLAAMVVVECIIVGQTTVSKAAMSRGMSPLIFTFYSYGFATLILLPSSFLFHSYVGRTLLYVGIRYSSPTLASAMNNLIPAFTFIFAIIFSLQFIVFNLVLQVSIMKEYPAELSVVFLYCFFATIISAVVTLIAERDASSWRLRPDIELIAILSSCGWINHNISWVLWCDVGKSQRREDG* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00780 189 PANTHER WAT1-RELATED PROTEIN 11 97 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00780 Eupl-Chr4 12041248 12049729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00780 94 169 Nodulin-like Gene Family AT5G40230 37.179 9.51e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00780 - - lja:Lj4g3v1535180.1 125.176