Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00772 ATGGACCGAATTCCCATCTGGATACTCTTCCTTTCTGTTTTTCTACTACTCCACGCCACTAATTCTGAAGAAGACGAGGTCAAGCGCTCGCTCATCACCTTCCTTGGGCAGCTATCTCCTACCAATAATGGCCAACGAGATCCCAATTGGGGTTGGAACATGACCTCCGATCCTTGCACTGATGGATGGAAGGGTGTGTCTTGCAATACCCAGTTAACTTCTGTGAAGAAAATCATCCTCGATGATCTAAATTTAAATGGAACTCTCGATGCTAATTCGCTCTGCACCGCGCAATCTCTTACCATCGTGAGCCTCAACAACAATGGTGTCCTCGGAGAAATCCCCGAAGAAATCGGGAACTGTAAGCAACTGACCCACTTGTATGTAAGTGGTAATCAGTTATCTGGAATCCTCCCTGACTCTATTTCCCGCTTAAATAATTTGAAGAGGCTTGATATCTCCAACAATAATTTCTCTGGCCTGCTTCCGGATTTATCCCGGATATCGGGTCTCGTATCGTTCCTAGCTGAAAACAATCAGCTTACTGGAAAGATACCCGGATTTGATTTTTCCAATCTTCAGCTGTTCAATGTTTCCAACAACAATTTTACTGGTCCCATTCCTGATCTCAAAGGCCGTTTCGTTTTGAGCAGCGTTTCGGGTAATCCTGGATTGTGTGGACCACCACTGCCTAACGCATGCCCACCTCCAAAAAAGGGTCACTTGAGTTTATCAATGGAAACAGGACCAAAAAGGATGGGAAGGTTGATGATGAAGCCTAAGGGATCAGCGACGGTGGACGATAGTAGTAGCATCAAGCCTAGTACTACTGATTCCAGTGAGTACAAGACTGGTGTTAGTAGATCGGATTATTCGATTGTGTCTGTTGATGAAAGTGCAATGATGTCGCTGGTCGTTCTTACGAGTCCGGTTGTGAAGGGGTTGAGATTTGAGGATCTACTAAAGGCTCCTGCTGAGATACTTGGAAGAGGAAAGCATGGTAGCCTCTACAAGGTCGTACTCGAGGATGGGATGATTCTGGCTGTGAAAAGGATCAAGGATTGGGCGATTTCGAGTGAAGATTTCAAGAGGAGGATGCAGAAGATAGACAAAGTGAAGCATCCAAATATATTGCCGGCCATTGCCTTTTATAGTTCCAAGAAAGAGAAGCTCCTGGTCTACGAATATCAGCAAAATGGAAGCCTCTTCAGGCTTCTCTATGGAACCCAAACCGGTCAAACATTTGACTGGAGTAGCAGGCTAAATGTTGCAGCTAGCATTGCCGAAGCTTTGGCTCTCATGCACGAGGAGCTACTTGAGGATGGGATTGCTCATGGGAACCTGAAATCCTCAAACATTTTTTTGAACAAGAACATGGATGCATGCATTTGTGAATACGGTCTAATGGTGGTAGATAATCAAGACCACTCTTCTGGTAACGATTACAAAACCATGAATCAGATCCGAGACAGTTCTGTGTATAGCACCTTCAAGGTAGACATGTATGGCTTTGGCGTCATTCTCCTCGAGCTACTAACAGGGAAGGTGATGAACAACAATGGGTTCGACTTGGCTAGATGGGTACACTCGGTGGTTAGAGAAGAATGGACCGTAGAAGTTTTTGACAAGGCCTTGATTAAAGAAGGAGCGAGTGAAGAGAGGATGGTGAACTTGCTACAGATAGCACTCAAGTGTATTAATCCTTCTCCAGAGGCTAGACCTAGCATGAACCAAGTTGCTGTTATGATCAAAACCATAATGGAGGAAGACGAGAGGTCCATAATCTCTGAACCATGA 1797 0.4496 MDRIPIWILFLSVFLLLHATNSEEDEVKRSLITFLGQLSPTNNGQRDPNWGWNMTSDPCTDGWKGVSCNTQLTSVKKIILDDLNLNGTLDANSLCTAQSLTIVSLNNNGVLGEIPEEIGNCKQLTHLYVSGNQLSGILPDSISRLNNLKRLDISNNNFSGLLPDLSRISGLVSFLAENNQLTGKIPGFDFSNLQLFNVSNNNFTGPIPDLKGRFVLSSVSGNPGLCGPPLPNACPPPKKGHLSLSMETGPKRMGRLMMKPKGSATVDDSSSIKPSTTDSSEYKTGVSRSDYSIVSVDESAMMSLVVLTSPVVKGLRFEDLLKAPAEILGRGKHGSLYKVVLEDGMILAVKRIKDWAISSEDFKRRMQKIDKVKHPNILPAIAFYSSKKEKLLVYEYQQNGSLFRLLYGTQTGQTFDWSSRLNVAASIAEALALMHEELLEDGIAHGNLKSSNIFLNKNMDACICEYGLMVVDNQDHSSGNDYKTMNQIRDSSVYSTFKVDMYGFGVILLELLTGKVMNNNGFDLARWVHSVVREEWTVEVFDKALIKEGASEERMVNLLQIALKCINPSPEARPSMNQVAVMIKTIMEEDERSIISEP* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00772 598 Gene3D Phosphorylase Kinase; domain 1 292 396 - -
Eupl04g00772 598 ProSiteProfiles Protein kinase domain profile. 322 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00772 598 PANTHER OS05G0588300 PROTEIN 8 587 - -
Eupl04g00772 598 MobiDBLite consensus disorder prediction 260 283 - -
Eupl04g00772 598 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Eupl04g00772 598 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Eupl04g00772 598 MobiDBLite consensus disorder prediction 264 283 - -
Eupl04g00772 598 Pfam Protein kinase domain 326 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00772 598 Gene3D Ribonuclease Inhibitor 189 234 IPR032675 -
Eupl04g00772 598 FunFam Nuclear pore complex protein NUP107 25 187 - -
Eupl04g00772 598 SUPERFAMILY L domain-like 52 230 - -
Eupl04g00772 598 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Eupl04g00772 598 Gene3D Transferase(Phosphotransferase) domain 1 398 597 - -
Eupl04g00772 598 SUPERFAMILY Protein kinase-like (PK-like) 326 582 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00772 Eupl-Chr4 11920654 11923146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00772 52 593 Receptor kinase-like Gene Family AT5G58300 35.172 7.67e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl04g00772 Pkinase 2.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00772 - - vvi:100255249 745.347