Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl04g00741 | ATGAGTATTGCTAAGGAGGTTCTGGGTGTTGCAACACAGATTATGGTTATTGCATTTGTCATCTCTGTGATTTTGTTATTTGTGGGTATTAGTGTTTTGGTCTTAATTCATGCTTGTATTGTTGGGAGGAACTTTAGGAGAGGGAACAATTCAGGTAATATGGTTGAGATGGGTAGCAGTAGCAATAGCAATAGAAGAAATAGCATGTCCCATGATGATTTAGAGAAGCTTCCTTGCTTTGATTTCAAACCAGGAGAGAATGGGAGTAGTCCTGTAGACTGTGCTGTTTGTTTGGAGAACTTCAAGATGGGTGATAAGTGTAGATTATTGCCCATCTGCAAGCACAGTTTTCATGCTCAATGTGTCGATTTGTGGTTGTTGAAGACACCCATTTGTCCTATCTGTCGAACTAGTGCCGATTCTCGGAAAGGTACATCAGTTTCGGGCGAGGAAAGTAGCCATTCGGGTGAGGTTCGATTTGAATTGAGAGAGAGAGAAGAAATTGTTGTTGGGACTCAAATTCCATCTCCTTTACACAATTCCCCTTCAGAACTTGCTGTGTGA | 564 | 0.4131 | MSIAKEVLGVATQIMVIAFVISVILLFVGISVLVLIHACIVGRNFRRGNNSGNMVEMGSSSNSNRRNSMSHDDLEKLPCFDFKPGENGSSPVDCAVCLENFKMGDKCRLLPICKHSFHAQCVDLWLLKTPICPICRTSADSRKGTSVSGEESSHSGEVRFELREREEIVVGTQIPSPLHNSPSELAV* | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl04g00741 | 187 | ProSiteProfiles | Zinc finger RING-type profile. | 94 | 136 | IPR001841 | - | |
Eupl04g00741 | 187 | FunFam | RING-H2 finger protein ATL2K | 69 | 142 | - | - | |
Eupl04g00741 | 187 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 9 | 150 | - | - | |
Eupl04g00741 | 187 | SUPERFAMILY | RING/U-box | 93 | 142 | - | - | |
Eupl04g00741 | 187 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 68 | 145 | IPR013083 | - | |
Eupl04g00741 | 187 | MobiDBLite | consensus disorder prediction | 139 | 153 | - | - | |
Eupl04g00741 | 187 | Pfam | Ring finger domain | 93 | 136 | IPR001841 | - | |
Eupl04g00741 | 187 | SMART | ring_2 | 94 | 135 | IPR001841 | - | |
Eupl04g00741 | 187 | MobiDBLite | consensus disorder prediction | 139 | 160 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl04g00741 | Eupl-Chr4 | 11484210 | 11485191 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl04g00741 | 17 | 147 | C3H Transcription Factor Family | AT4G28890 | 27.857 | 1.07e-16 | 75.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl04g00741 | - | - | nnu:109115469 | 219.55 |