Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00739 ATGGAGTCCAAGGATTCGAGCAGTAGCACCAGCGGTGCTAAGCCCGAGACTCGTAAGGTGCTCTTTGGAATCGATCTCAACGAGATCCCCTCCTCTGCGTCGAGTGAAACCCTCCCCTCTCCTGGTCGCGACGCCTACGAAGTTGTTCGGAGCGTCCACGATAACCCTTCTCCGGCGCTCGGACCTCCGGCTGACTTGCCCAGTGAGGTTCGGGGCGTGCCTTGTGTGTGCGGCCGTGTAGAGGCGAGAGGTGGCGTGGTGGTCTGTGACGGTTGCGAGCGGTGGTTCCACCTGAGCTGCGCTGGGATGCGGTCACGCCAGGCGGTTACGCTCGAGGACTGGATTTGTGGTGACTGTGTGAGGAATGGAGTAGGGAGTAAGAGGTGGCCGCTGGGAGCGGTGTGTTCAGGGCCGAAACGGAGTGGTGTTAGGCTTTTGGATATTAATGCTTTGCCACCGAGTGATGGCGAGGGCGAGGGAAGCGAAGAGTTGACGAATTCGAGAATGCACAATCTGGGTGAAAAATCTTTTATAGGCATCCCATTTGGTACCCCAGCGACATATCCGAACTTTTGGTATACGGGAAATGGCTTCAGTTTACAAAGGGAATCTGGCATGATGACACACCTTGTTAAATCCGGCTCTGAAGAGAGAGTGCATCACAGACTGACTATGGGTAAAAGTTTTGAGGAAGCAGATTTGCGCTCCTCTCTTAAAGGAAGGATTAGGAGTAATAATACTAATACAGCACTTAGATTGCCAGTTCAGAATACGAGCGAGATGTGTTTGCAGTCTTTGAGGGACTTTGTTTTTGAAAGGCAAGGTATTCTGGGAGAAGGTTGGCATGTGGAACTTAAACCAGATGCAAACCATGCATTTGCGGTCTATTGTGCTCCTGATGGAAAGAAGTTTGAGTCAATGTCTGATGTTGCCTGTCATCTTGGGCTGGTTTCGAACTGCACTTCTATGGAAATCGAGGATAGAAGTGATGGATTAGCTTCAGTGCAGAAAGGATTACCTCAACGCAGAAGAAGAAAGGAGTTTGCAAGACATGCAAGAATCAGTAGTTTCACAGGGAATCAAGAAGTTTTAAGGAGTGGTTGCGGCGGGGTTCTCTCCTCAGATGTTGTGATCGTGGAGCATCACTCATGCAATTTTGGGAGCAATGCTAGAATTACAGAAGCTGGACCTGGGGGAATTGATGGCAGTGGGACTCGGCGATCCAATGATGGACTTCCAGTTCAATATGGAGATTTTTTTATTCTCTGTTTAGGGGAGGTTGACATGCGACCATCATATCACAGCAGTAGCCAGATATGGCCTGTAGGTTATAGATCCTGTTGGCACGATAAGATTACAGGGTCTCTTTTTGTCTGTGATGTGTTGGATGGCGGTAATTCTGGACCTGTTTTCAAGGTTAGAAGATGTTCGTGCTCCACATCGCTAATCCCTATTGGGTCAACTGTCCTCTTGAGACCAACACTTGGCCGATCTGATACTAAAGACGAAGTAGAAACTGATCCTGTCATTACTTCTGACATGGGTTATGATGAGGATAATAATATTCAGATGGTTCTTTTGGATCCTAGCCCACTGGAACAAGATCTTTTATCATGTTTTGGAAGTAGTTTAAGTGAAGCTTGCAATGTTCAAACAACAGATGGTTTGCCACCACAATCCAATTGCCTTCCAGAAACATCTGGCGAACTTGTACCCAAGAATTCAGGTTTAAGGGATGAAATTGGCGAGTTCTTTGCAGAAGGGAGATCATCTTCGTCAGTATGGGGGAAGGTGTCTGAGACACTCGTTGATGCTTGCCGTGAAGTCTACAAGCAGTCAGGTACTCTTCAGTTTTATTGCAAGCATGAGTTAGATGTAATGTGTTCATCACACTTGAATGTCGAGGATGCCAAGATCGAAGATAATCTTGGCTCGTTAGCCAAATTTTGCAATTTTTCTGGCTCTATCAATATCCCACATGTAATTCGGAGTGACTATGAGCTTGAGACATTGTGCAAAGCACTGGAAAATTGGTTGAACCAGGATAGATTTGGACTAGATATGGAATTTGTGCAGGAAATTATTGAACAGCTTCCCGGAGTCAATGCCTGTTCAGAATATCAATTTCTGAATAAGAGAAGTGACTATTCAACTTCACGAACCGTTGGAAGTGGGCTTCTTCTGGCTAAACGAAAGAGTGATGTACAAGGTGAGGAAGAAGAAGCCTTAGGTCTGTTTAAAGGATCTAAAAGACCCAGGAAGCAGGATTTGATTCAAGACCCTGGAATGGTTGACCATTGTCCTCCTCCGGGTAAGCCTTTGAGCCCAAGGCTTCCTGCAGAGCTTGTTGGTGATGTTCTTCAGGTATGGGAGTTACTGTGGCGTTTCTATGAGATTTTGGGTCTGAAGGAACCTTTGACATTTGAGGAACTTGAAGAGGAACTTATAAATCCCTGGTTTGATGGCTCGAGTTCTCTTGAGAAGATTGAAAAGGAAATACAGGAAAATAGAGATCCAACTTTGCTTAGAAGCGATGACGCAATTGGTCATTCCTTGTCCTTAAGCGGTGAATCTGATTCAACAGTTCCTGGGGAAAATGTACATAAATTCATTAGAATAGAAACAGGATCTATGAAGGAAGCTGCTCAAATTAGACTAGCATCTCGTACTTATGATCGATGTACAGGTGTGGCTTTGACAAAGGTTCACAGCTCACTGCTGAAAGTGCTAGTAGGTGAGCTACAGTACAAGGTTGCATCACTCGTAGATCCAAATTTTGACGCTGGAGAATCAAAATCGAGGCGGGGGAGAAAGAAAGATGCAGACAACTCAATTCCTATGAAAAAAACGAAGATTGATCTGCTCCCTATTAATGAACTGACTTGGCCAGAATTAGCTCATAGATACATTTTAGCCATCTCATCTATGGATGGTAACCTTGATTCTGCAGAGATTATTAGTCGCGAGGGTGGAAAAGTGTTTCGCTGCTTACAAGGTGATGGTGGGATGCTTTGTGGTTCACTTACTGGAGTGGCTGGAATGGAAGCAGATGCCTTGTTTCGTCTCAGCCAATACGTTTCATTCCGTCATCTTACTTTGACACTAAACGAGACTGAGATTGTGAACCTTTACTTGAGTTGCATTCTCAAGTGTTTTGAAGCAGTGTCGGGTTTTCTTATTTGTTTCTTCAAAAGCGAAGTTTATTGTATAGGGGACGTTGATAATTTACACAAGTTCACTAAGTGTCTGAGGTCTAAGAAAGCTGTTCTTTCGGTGCTGGCAGATGTCTGCGGTGAAGGTCCGCAGCAAAAACCCGACAAGGGAAGAAAGGGAAAGAGTGGCAACTCTGTATCCAATATGATTATGAAACAGTGTCGTAATGTATTACGCCATGCTGCTGCTGCAGATGAAGGAAAAGTTTTCTGCAATTTGCTGGGAACAACAGCATTGAACCCTAATGATAATGAGGATGATGGTATTCTTGGATCTCCTGCCATGGTATCTCGTCCTTTGGATTTTAGGACCATTGATTTGAGATTGGCTGTTGGGGCTTATAGCGGCTCTCATGAAGCTTTCCTTGAGGATGTTCGCGAGGTTTGGCATAATATACGCACTGCTTATGGGGATCGGCCTGATTTGATGCAATTGGCTGAAAGATTATCCCCACAATTTGAATCATTATATGAAGAGGAGGTGCTCACCCTTGTCCAGAAATGTAAAGAGCATACTAATCTCGAATGCTCAAATGCAGCAGCAAAGAAAGAGCTGAATGATGTTCTTGTCTGTGCGAATGAGATTCCCAAAGCTCCCTGGGATGAGGGTGTCTGCAAAGTTTGCGGCATCGATAAAGATGATGAAAGTGTTTTATTGTGTGATACCTGTGATTCTGAGTATCATACTTATTGCTTGAATCCTCCACTTGCAAGGATTCCTGAAGGGAACTGGTATTGTCCTTCGTGTGTTGCTGCTCAAGGTAAGACTCAAGATGCATCAAAGCGTACTCAGGTCAGTGGCCGACGTCAACGAAAGAGATACCAGGGAGAGGACACTCGTGTTCTCTCAGAGGCACTGAACCAGTTAGCAGCTACAATGGAAGAAAAAGAGTACTGGGAGTGGAGCGTAGAGGAGAGAATTTTCTTGCTAAAGTTTCTATGTGATGAGGCACTGAACTCAGTCATTATTCGCGAACACTTAGATCAATGTGCTGATATGTCGGCTGATTTGCAGCAGAAATTGCGTTCTCTTCATGTAGAATTGAGAAATGTAAAGTTCAAAGAAGAAATCCTGGCTGCAAGAGCCACAAAGGAAAACATGATCATGCTTAATGGAGTTGGAGAAGCTGGAAGAGAAGGGATGACTACTATGCTAACAAATCATGGTAGATGGACGGGGCAGCGGCAGAGTTTGAATAACAAATACCCCTATTGTGCGGCCTTTTCTGGTAATCTGATACAGTTAGAGGATGTTCCTGGGGAGAATGGGTTAAACGATCTCAATAAACAGTCATGCTGGTTTTACTCAAAAAACATCTCAGAGAAACATTGTAATGGTGGTAAAACCCAAACTATGAAGCTTGCTGATTCTGAAAGTCAAACAAAAGATGCCCCTTTGGTCATGGACAACAGCCTACTACTTGAAAATCTTATTCCCTGTATGATTTCCAGCAATAGAAATGAATTGAATAGACAAAATGAGATGCCTCTGTCAACTCAGCAACAAGAAATTGATGACTCAGGCAGAGAACACAGTGTCCGGAGTAATTTGAACAGGAAACTTGAATTTGATGTGGAAAGGAATGGATCTGTGTTGCCTAATTTTGAAGTCCTACAGGGTTCTCATCTCTCAGCAGACACCAGGAAAATGCATTTGGCTGAACATGTGCCTCCCATGCCTACGAACTTGGATAGTCTATTCCCTGGCCATCAATCCAATGTTCAACCTGATGTGAACGAACCACAAGCCTACAGCCTTGAGGTAAACTCTGTCAAGAATGAGATTTTGCTTCTGCAGGATTCAATTTCAAGTATAGAATCACAGCTTATGAAAGTATCCATGCGGAGAGATTTTTTGGGTAGGGACTCTGCTGGCCGACTGTACTGGGTTTTAGGCAGGCCAGGTAAATGTCCTTGGTTGGTTGTTGATGGGAGTATGCCAGTGCAACAAAAAAGAAGGAAAGTGAAAGAGCGCAGGGACCCCTTTGCAGACAGTTTGACTTCGAGGTATTCCGTTCCATTCTGCAGTGAGACTCATCCAAGTCCAAGAGGATCCAATGTTTCCAGTTCATATGGGTATGAAGCGTACGAAGGTGTTCAGAGTTTTTCTTCATGGGTTTCCTACGAATCTGATGTAGAAATTCAAGAACTCGTTGGATGGTTGAGAGATGGTGATCCAAGAGAGAGAGAATTGAAAGAGTCCATTTTGCAGTTGCAGAGATTGAGGTCCCAAGACTCCCAACAAGCTAGAAACCATGTTGATGATGACTCTCAAGTGACTTTGTCGAAGTCCTTGAATATTGAAAAAGCTGTAGCTCCTAATTCTCTTGTCACTAAGGCAGCCACTGTACTGGAGAAGAAGTATGGTCCTTGCTTGGAGCCAGAAACCACTGACATCCCGAAGAAGCGGGGGAGGAAGGCAAAAGTAACTTATGGAGAGAGAATGTACAGGTGCGAATGCCTTGAACCCATATGGCCTTCTAGACACCATTGCATCTCGTGTCACCAGACCTTTTGCACTAATGTGGAGCTTGAGGGGCATAACGATGGAAGGTGCAATTCAGGCCCACCAGCCCCTGATGACAGCAAAGAAAATGATGATACCTCAAAAGGGAAGGGGACGATGAGATCTGAAACCACCCGTGAGGAGTACACAGAAGAAATGGATACAGTTGATTCACTGAAGAGTGGGAAATTCGACATCAGCTCCAGATTGATTAAATTTCAAAGGAAGGGAGTGGTGTGCCCACATGACATTGAGGAGATCAGTAGCAAGTTCATCACAAAAAATTCTAACAAGGAATTGGTGCAGGAAATAGGACTTATTGGTTCCGATGGGATTCCGTCATTTGTCCCACCCACATCGCCATATATCCATGACCCGGCGCTAATATTAGACCCTAGTAAAAAAGATGAAGCTGATACAGGTGTTGGACCCTCCATTCTGGAAGAAAAGCTGCAAGTTTCACTACGAGAGAACAGTGTTGCCGCCAATTTGAGCCATGATAATATTACAAACCATTTACCTAAAAGATGTGCTGGGAGCGGCACCGATGAGGAGGCATTAAAAACCGAGGTACCCAAGTCAGGCTGTAAGAATGATAGAGATCAAGTATCTTCTCCGAAAAATAGAATTCCTGAAATGGAGGTTGCTCTCTGCTGCGTAGTGCCCGAGTCTTCATTGAGGCCTGTAGTGGGCAAGGTTTCTCAAATTCTAAAGCGGCTCAAGATTAACTTACTTGATATGGATGCTGCCCTCCCTGAAGAAGCACTTAGACCATCGAAGGTCCACTCGGCAAACAGATGTGCCTGGCGCGCGTTTGTTAAATCTGCAGAGTCAATATTTGAGATGGTTCAAGCAACGATCGTATTCGAGGACATGATCAAGACCGAGTACTTGAGGAATGGATGGTGGTACTGGTCATCACTCTCAGCTGCAGCCAAGACCTCCACCATCTCCTCTCTAGCCCTACGCGTATATTCACTGGATGCCACCATCATATACCAGAAGACTCCAACTGCTTCGGATCCAACAGAAAATCCGAAGCCTGGCAAGAAAAGGAAGGACACTGAGGGTTGA 6792 0.4486 MESKDSSSSTSGAKPETRKVLFGIDLNEIPSSASSETLPSPGRDAYEVVRSVHDNPSPALGPPADLPSEVRGVPCVCGRVEARGGVVVCDGCERWFHLSCAGMRSRQAVTLEDWICGDCVRNGVGSKRWPLGAVCSGPKRSGVRLLDINALPPSDGEGEGSEELTNSRMHNLGEKSFIGIPFGTPATYPNFWYTGNGFSLQRESGMMTHLVKSGSEERVHHRLTMGKSFEEADLRSSLKGRIRSNNTNTALRLPVQNTSEMCLQSLRDFVFERQGILGEGWHVELKPDANHAFAVYCAPDGKKFESMSDVACHLGLVSNCTSMEIEDRSDGLASVQKGLPQRRRRKEFARHARISSFTGNQEVLRSGCGGVLSSDVVIVEHHSCNFGSNARITEAGPGGIDGSGTRRSNDGLPVQYGDFFILCLGEVDMRPSYHSSSQIWPVGYRSCWHDKITGSLFVCDVLDGGNSGPVFKVRRCSCSTSLIPIGSTVLLRPTLGRSDTKDEVETDPVITSDMGYDEDNNIQMVLLDPSPLEQDLLSCFGSSLSEACNVQTTDGLPPQSNCLPETSGELVPKNSGLRDEIGEFFAEGRSSSSVWGKVSETLVDACREVYKQSGTLQFYCKHELDVMCSSHLNVEDAKIEDNLGSLAKFCNFSGSINIPHVIRSDYELETLCKALENWLNQDRFGLDMEFVQEIIEQLPGVNACSEYQFLNKRSDYSTSRTVGSGLLLAKRKSDVQGEEEEALGLFKGSKRPRKQDLIQDPGMVDHCPPPGKPLSPRLPAELVGDVLQVWELLWRFYEILGLKEPLTFEELEEELINPWFDGSSSLEKIEKEIQENRDPTLLRSDDAIGHSLSLSGESDSTVPGENVHKFIRIETGSMKEAAQIRLASRTYDRCTGVALTKVHSSLLKVLVGELQYKVASLVDPNFDAGESKSRRGRKKDADNSIPMKKTKIDLLPINELTWPELAHRYILAISSMDGNLDSAEIISREGGKVFRCLQGDGGMLCGSLTGVAGMEADALFRLSQYVSFRHLTLTLNETEIVNLYLSCILKCFEAVSGFLICFFKSEVYCIGDVDNLHKFTKCLRSKKAVLSVLADVCGEGPQQKPDKGRKGKSGNSVSNMIMKQCRNVLRHAAAADEGKVFCNLLGTTALNPNDNEDDGILGSPAMVSRPLDFRTIDLRLAVGAYSGSHEAFLEDVREVWHNIRTAYGDRPDLMQLAERLSPQFESLYEEEVLTLVQKCKEHTNLECSNAAAKKELNDVLVCANEIPKAPWDEGVCKVCGIDKDDESVLLCDTCDSEYHTYCLNPPLARIPEGNWYCPSCVAAQGKTQDASKRTQVSGRRQRKRYQGEDTRVLSEALNQLAATMEEKEYWEWSVEERIFLLKFLCDEALNSVIIREHLDQCADMSADLQQKLRSLHVELRNVKFKEEILAARATKENMIMLNGVGEAGREGMTTMLTNHGRWTGQRQSLNNKYPYCAAFSGNLIQLEDVPGENGLNDLNKQSCWFYSKNISEKHCNGGKTQTMKLADSESQTKDAPLVMDNSLLLENLIPCMISSNRNELNRQNEMPLSTQQQEIDDSGREHSVRSNLNRKLEFDVERNGSVLPNFEVLQGSHLSADTRKMHLAEHVPPMPTNLDSLFPGHQSNVQPDVNEPQAYSLEVNSVKNEILLLQDSISSIESQLMKVSMRRDFLGRDSAGRLYWVLGRPGKCPWLVVDGSMPVQQKRRKVKERRDPFADSLTSRYSVPFCSETHPSPRGSNVSSSYGYEAYEGVQSFSSWVSYESDVEIQELVGWLRDGDPRERELKESILQLQRLRSQDSQQARNHVDDDSQVTLSKSLNIEKAVAPNSLVTKAATVLEKKYGPCLEPETTDIPKKRGRKAKVTYGERMYRCECLEPIWPSRHHCISCHQTFCTNVELEGHNDGRCNSGPPAPDDSKENDDTSKGKGTMRSETTREEYTEEMDTVDSLKSGKFDISSRLIKFQRKGVVCPHDIEEISSKFITKNSNKELVQEIGLIGSDGIPSFVPPTSPYIHDPALILDPSKKDEADTGVGPSILEEKLQVSLRENSVAANLSHDNITNHLPKRCAGSGTDEEALKTEVPKSGCKNDRDQVSSPKNRIPEMEVALCCVVPESSLRPVVGKVSQILKRLKINLLDMDAALPEEALRPSKVHSANRCAWRAFVKSAESIFEMVQATIVFEDMIKTEYLRNGWWYWSSLSAAAKTSTISSLALRVYSLDATIIYQKTPTASDPTENPKPGKKRKDTEG* 2264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00739 2263 MobiDBLite consensus disorder prediction 1921 1958 - -
Eupl04g00739 2263 CDD PHD1_Lid2p_like 1275 1320 - -
Eupl04g00739 2263 ProSitePatterns Zinc finger PHD-type signature. 1276 1320 IPR019786 -
Eupl04g00739 2263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 124 IPR013083 -
Eupl04g00739 2263 ProSitePatterns Zinc finger PHD-type signature. 75 119 IPR019786 -
Eupl04g00739 2263 ProSiteProfiles Bromodomain profile. 1166 1214 IPR001487 GO:0005515
Eupl04g00739 2263 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1686 1808 IPR028941 -
Eupl04g00739 2263 SUPERFAMILY Bromodomain 1113 1230 IPR036427 GO:0005515
Eupl04g00739 2263 ProSiteProfiles Zinc finger PHD-type profile. 1273 1323 IPR019787 -
Eupl04g00739 2263 Pfam Bromodomain 1164 1218 IPR001487 GO:0005515
Eupl04g00739 2263 SUPERFAMILY FYVE/PHD zinc finger 1267 1325 IPR011011 -
Eupl04g00739 2263 SUPERFAMILY DNA-binding domain 269 315 IPR016177 GO:0003677
Eupl04g00739 2263 ProSiteProfiles FYR domain FYRC motif profile. 567 711 IPR003889 GO:0005634
Eupl04g00739 2263 PANTHER OS02G0192300 PROTEIN 1085 2259 - -
Eupl04g00739 2263 Gene3D - 1114 1241 IPR036427 GO:0005515
Eupl04g00739 2263 Gene3D - 412 489 - -
Eupl04g00739 2263 MobiDBLite consensus disorder prediction 2243 2263 - -
Eupl04g00739 2263 CDD PHD_SF 75 119 - -
Eupl04g00739 2263 ProSiteProfiles Zinc finger PHD-type profile. 72 122 IPR019787 -
Eupl04g00739 2263 ProSiteProfiles FYR domain FYRN motif profile. 411 464 IPR003888 GO:0005634
Eupl04g00739 2263 Pfam Methyl-CpG binding domain 272 326 IPR001739 GO:0003677
Eupl04g00739 2263 SUPERFAMILY FYVE/PHD zinc finger 70 130 IPR011011 -
Eupl04g00739 2263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1258 1346 IPR013083 -
Eupl04g00739 2263 SMART PHD_3 74 120 IPR001965 -
Eupl04g00739 2263 SMART PHD_3 1275 1321 IPR001965 -
Eupl04g00739 2263 Pfam PHD-finger 75 120 IPR019787 -
Eupl04g00739 2263 Pfam PHD-finger 1275 1321 IPR019787 -
Eupl04g00739 2263 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1355 1399 IPR028942 -
Eupl04g00739 2263 MobiDBLite consensus disorder prediction 1931 1958 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00739 1632 2254 C2H2 Transcription Factor Family AT3G01460 40.981 1.01e-119 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Eupl04g00739 WSD 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00739 K22768 - nnu:104593227 2690.99