Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00731 ATGAAGGAAACAGGTGATGGGTTTGTTAGGGCAGATCAGATCGATCTGAAAAGCTTGGATGAGCAGCTTGAGAGGCATCTGAGTCGAGCATGGACTATGGAGAAGAAGAAGGAGGAGGGAGAAAGGAAGGAGAGGGCCAATAGGGAAGACTGGGAAATTGATCCCAGTAAGCTTATTATAAAGAGTGTTATTGCTCGAGGCACCTTTGGCACCGTTCACAGAGGGATTTACGATGGCTTAGACGTCGCAGTAAAACTGCTTGATTGGGGAGAAGAGGGCCACAGGACAGAAGCGGAAATTGCCTCACTTAGGGCAGCTTTTACACAAGAAGTTGTTGTTTGGCATAAGCTGGAACATCCTAATGTAACAAAGTTTATAGGGGCTACAATGGGCAATTCGGAGCTAAACATACAAACTGACAATGGTCTCATTGGCATGCCGAGTAATATTTGCTGTGTTGTCGTGGAATATCTTCCTGGGGGTGCACTTAAATCTTACCTCATAAAGAATCGGAGAAGGAAGCTGGCTTTCAGAGTTGTTGTCCAATTGGCCACAGATCTCGCACGAGGGTTGAGTTACCTTCATTCCAAGAAGATTGTCCATAGAGATGTGAAGACAGAGAACATGCTTCTGGATAAGACACGCACTGTAAAAATAGCTGACTTTGGGGTTGCTCGTGTTGAGGCTCAAAACCCTAATGATATGACTGGTGAGACTGGGACCCTTGGTTACATGGCTCCTGAGGTCCTCAATGGCAACCCGTATAACAGGAAATGTGATGTATACAGTTTTGGTATCTGCTTGTGGGAGATATATTGCTGCGATATGCCATATCCTGATCTCAGTTTCTCAGAAGTGACGTCAGCTGTTGTCCGCCAGAATCTGAGACCAGATATACCCCGCTGTTGCCCAAGCTCTTTAGCAAATGTAATGAAGCGATGCTGGGATGCAAACCCTGACAAGCGACCAGAGATGGACGAGGTGGTGTCCATGTTGGAGGCCATCGACACGTCAAAGGGTGGAGGTATGATCCCTCTCGATCAGCCTCAGGGTTGTCTGTGCTTCCGTAGATATCGAGGGCCTTGA 1086 0.4715 MKETGDGFVRADQIDLKSLDEQLERHLSRAWTMEKKKEEGERKERANREDWEIDPSKLIIKSVIARGTFGTVHRGIYDGLDVAVKLLDWGEEGHRTEAEIASLRAAFTQEVVVWHKLEHPNVTKFIGATMGNSELNIQTDNGLIGMPSNICCVVVEYLPGGALKSYLIKNRRRKLAFRVVVQLATDLARGLSYLHSKKIVHRDVKTENMLLDKTRTVKIADFGVARVEAQNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPDIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPLDQPQGCLCFRRYRGP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00731 361 FunFam Kinase suppressor of Ras 1 47 142 - -
Eupl04g00731 361 Pfam Protein tyrosine and serine/threonine kinase 60 332 IPR001245 GO:0004672|GO:0006468
Eupl04g00731 361 CDD STKc_MAP3K-like 64 332 - -
Eupl04g00731 361 Gene3D Phosphorylase Kinase; domain 1 46 141 - -
Eupl04g00731 361 SMART serkin_6 58 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00731 361 PIRSF ILK 10 341 - -
Eupl04g00731 361 PRINTS Tyrosine kinase catalytic domain signature 155 168 IPR001245 GO:0004672|GO:0006468
Eupl04g00731 361 PRINTS Tyrosine kinase catalytic domain signature 259 281 IPR001245 GO:0004672|GO:0006468
Eupl04g00731 361 PRINTS Tyrosine kinase catalytic domain signature 303 325 IPR001245 GO:0004672|GO:0006468
Eupl04g00731 361 PRINTS Tyrosine kinase catalytic domain signature 193 211 IPR001245 GO:0004672|GO:0006468
Eupl04g00731 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Eupl04g00731 361 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 49 335 - -
Eupl04g00731 361 SUPERFAMILY Protein kinase-like (PK-like) 44 332 IPR011009 -
Eupl04g00731 361 FunFam Serine/threonine-protein kinase HT1 158 343 - -
Eupl04g00731 361 Gene3D Transferase(Phosphotransferase) domain 1 158 343 - -
Eupl04g00731 361 ProSiteProfiles Protein kinase domain profile. 58 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00731 Eupl-Chr4 11336091 11342110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00731 6 361 MAP Kinase Kinase Kinase AT3G22750 69.722 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl04g00731 PK_Tyr_Ser-Thr 4.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00731 - - nnu:104593224 681.404