Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00726 ATGAAGAAGAGTTGCAGCAGTGGTTCTTCTAAACTTGATCGAAAGACTGTTGAGAGAAATAGGAGAATGCACATGAAAAGTCTTTGCTTCAAGCTCTCCTCTTTCATCCCTGATCATCACAACTCCTCTAAGGACATATTGTCACAACTAGATCGGTTGGATCACGCGGCTGTTTACATAAAGGAATTGCAAGAAAGAATAGAACAATTGAAGGGAAAGAAGCAATTACTGATGAGTATCAAAGGAATTAACAATGATATTAGAGATTCGATGGCGATTAGCTCAAGTTTGCCAGTTCTTGAACTAAGGGACTTGGGTTCTTCTTTGGAGGTGACTTTGATTAGTGGATTGAATAAGAACTTCATGTTTTATGAAGTTATTAGTGTTCTTGAGGAAGAAGGAGCTGAAGTTGTGAATGCTAGCTTCTCTGTTGTGGGTAATAAGATTTTCCACACAATCCATTCTCAGGTCACCAGTTCAAGAGTTGGTGTGGAGACTTCAAGGGTATATGAAAGATTGAAGGAGTTAGTGAATTGA 537 0.3873 MKKSCSSGSSKLDRKTVERNRRMHMKSLCFKLSSFIPDHHNSSKDILSQLDRLDHAAVYIKELQERIEQLKGKKQLLMSIKGINNDIRDSMAISSSLPVLELRDLGSSLEVTLISGLNKNFMFYEVISVLEEEGAEVVNASFSVVGNKIFHTIHSQVTSSRVGVETSRVYERLKELVN* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00726 178 Gene3D - 2 90 IPR036638 GO:0046983
Eupl04g00726 178 SMART finulus 15 69 IPR011598 GO:0046983
Eupl04g00726 178 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 77 IPR036638 GO:0046983
Eupl04g00726 178 Pfam Helix-loop-helix DNA-binding domain 14 64 IPR011598 GO:0046983
Eupl04g00726 178 Coils Coil 53 80 - -
Eupl04g00726 178 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 177 - -
Eupl04g00726 178 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 63 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00726 Eupl-Chr4 11262448 11265050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00726 4 178 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.838 1.13e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl04g00726 HLH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00726 - - ming:122069410 248.44