Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00714 ATGGCCAAAATTGTACCTCGAGCTCCAATGAAAAATAGACACGATATGCATCTCCATGGCGACTCCAGTGGTGAAGGCTTCATGGGATCAGTAATCATTTTCAAAAGCAGGAATGTATTGGGACCCCACAAGGAGAAAGTCAGTGTTGACATTCCCCACCCAGGGCAATTGCCAAAGTTAGAATGTTATAGTATATTTAGTGTCCAAGGATGCAACCTGTGCTTAACCATTCTTGATAGTCCTAATGCTCTTACAGTTCACCGACCGACGTGCCAACTCTCACAGGGACCGCTTTTTCAATTGGCGAACTTATACATACATGAAAATTTCAAAATCGACAATGGAAGAACAAGAGGTCCACGAGTAGTTTCCCTAGCTTGCAAAATGGTTGGTGGTGGAAGCGATGGCTCGCTAGATCTTTGTGCAAGGGTGTGTCTCATTGATGAGGATGAAAACATCGTGTTTCATACTTATGTCAAGCCCCAGATTTCCGTGACGAACTATAGGTATGAAATGACTGGCATGCGACCGGAACACTTAAGGGATGCAATGACAGTGAGGGAAGCGCAAAGGAAGATTCAAGACTTCTTGTGCAATGGTGAAGCAGTATGGAAGATTCGTTCCAGAGGTGGAAAAGCAAGGATTCTAGTGGGACATGGTTTGGATCGTGACCTTGATTGTTTAGGAATGGATTATCCTGCACACTTGATCAGGGACACAGCCAAATATCCTCCCTTGCTGAAAACAAGCAAGCTCAGCAACTCACTCAAGTATGATATTCAAACGGGCGGGCAAAACCCTTATGAGGATTGCGTAAACACAATGAGGCTTTACACTAGAATGCGATGTCAAGTTCATCAAGTGGAGGACTGTCCGATGGCTACTGACGCACAAAACTGTAACAATTTTGCAACCTGGAGGCAGAACGAACTCGAACGAATGACCCCCGATCAATTATTGGAGATTTCAAGGTCTGATTACTATTGTTGGTGCTTGGACTCCAAGAAAGTGCAGGCAGGAACCATGAACACCAATTTGTCCTAA 1044 0.4454 MAKIVPRAPMKNRHDMHLHGDSSGEGFMGSVIIFKSRNVLGPHKEKVSVDIPHPGQLPKLECYSIFSVQGCNLCLTILDSPNALTVHRPTCQLSQGPLFQLANLYIHENFKIDNGRTRGPRVVSLACKMVGGGSDGSLDLCARVCLIDEDENIVFHTYVKPQISVTNYRYEMTGMRPEHLRDAMTVREAQRKIQDFLCNGEAVWKIRSRGGKARILVGHGLDRDLDCLGMDYPAHLIRDTAKYPPLLKTSKLSNSLKYDIQTGGQNPYEDCVNTMRLYTRMRCQVHQVEDCPMATDAQNCNNFATWRQNELERMTPDQLLEISRSDYYCWCLDSKKVQAGTMNTNLS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00714 347 Gene3D - 119 298 IPR036397 GO:0003676
Eupl04g00714 347 CDD REX4_like 123 279 IPR037431 GO:0006364|GO:0008408
Eupl04g00714 347 SUPERFAMILY Ribonuclease H-like 135 281 IPR012337 -
Eupl04g00714 347 SMART exoiiiendus 121 287 IPR013520 -
Eupl04g00714 347 Pfam Exonuclease 142 241 IPR013520 -
Eupl04g00714 347 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 101 335 IPR047021 GO:0004527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00714 Eupl-Chr4 11001512 11004174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00714 55 334 C2H2 Transcription Factor Family AT5G40310 66.323 1.50e-142 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00714 - - nnu:104593205 432.95