Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00708 ATGGCTAGTATTACTCACTCAAACCTCTCCATAAGCCTTCTTCTGATCGTACTCATCACTACCATTTCATCTCCGGCTTCGGCACAGCTCTCAGTCTCCTTCTACGCCAACACATGTCCTTCTGTCTTTGACACAGTTCGAGCGGCCACTCGATCGGCCATCAACAGAGAGGCTCGCATGGGGGCATCCCTTATACGCATGTTCTTCCATGATTGTTTTGTTATTGGTTGTGATGCCTCAATTCTTTTGGATGGTGCTGATGGCGAACAAACTGCACCGGCAAACGCTGCTGGATCCGTAAGAGGGTATGAGGTTATCGATAGCATAAAGACACAAGTTGATACAGCATGTGGGAGAAGTGTAGTCTCATGTGCAGACATCCTAGCCATTGTCGCTCGTGACTCGGTCGTTGAAGGTTGTGATGGAGGAATTCTTTTGGATGATATTGGATCATTTGTAGGAGAAAAAACTGCACCAGCAAACAATAACTCCATAAGAGGTTACGAAGTAATCGATAGCATAAAGACACAAGTTGATAGAGCATGTGGGCGTAGTGTAGTCTCATGTGCAGACATCCTAGCCGTTGCCGCTCGTGACTCGGTCGTCGAAAATTCTAGCTCTGCCACTACCTCCATGGAACATGGATATGATGCCTCAGCACAGCTCTCAGTCTCCTTCTACGCCAACACATGCCCTTCTGTCTTTGACACAGTTCGATCGGCCACACGGTCGGCCATCAACAGAGAAGCTCGCATGGGGGCATCCCTTATACGCATGTTCTTCCATGATTGTTTTGTTAATGGTTGTGATGGAGGAATTCTTTTGGATGATACTGGATCATTCGTAGGCGAAAAAACTGCACCGGCAAACAATGGCTCCGTAAGAGGGTATGAGGTAATCGATAACATAAAGACACAAGTTGATACAGCGTGCGGTCGTAGTGTAGTCTCGTGTGCAGACATCGTAGCCATTGCCGCTCGTGACTCGGTCGTCGAAAGACCAAAACTCAATCTGCTCTCAGCAGCTGTCCCAGCAGGAATGGCTGCTTATTCACTGATTTCTTGTGCGAATGCTCCAACGACATTCTCTCCATCTCCGACCAAAAAAACTAATTACGCCACTCTCTCCAAATCTCTCTTCCTCTTTCGCAAAAACCCTAGTTTTTCTACCATTTCTCCTCTTCTTTGCGTTCTTCACAACAACAATACCAACAACGGCAACAATTGCAGAAACAATCTCTCCATTAACAACAAACCGTCAATCTTACCCAAATTCTTCCTCACCAGTAATCTCTTCTCTTCTGCGAGAGATTCTTTGTTCGTTCTCTGCACCTCTCTCGCTTTGTCCTTCTCTCTCTTCATCGGCGATGTCGATTCCGCATCCGCTTTCGTCGTCACCACTCCTCGTAAATTGCAGTCCGATGAGCTCGCCACTGTTCGTTTGTTTCAGGAGAATACCCCCTCCGTTGTCTACATCACCAACCTCGCTGTCAAGCAGGATGCGTTTACGTTGGATGTGTTGGAGGTGCCACAGGGCTCTGGGTCGGGATTTGTCTGGGATAAAGATGGTCACATTGTTACAAATTATCATGTAATTCGCGGTGCGTCTGATCTCAGGGTCACTCTAGCTGATCAGTCAACTTATGAAGCAAAAGTTGTTGGATTTGACCAAGACAAGGATGTTGCTGTACTGCGTGTTGATGCTCCAAAAGATAAACTAAGACCCATACCTGTTGGCGTCTCTGCGGATTTGCTCGTTGGTCAGAAAGTATATGCCATTGGGAATCCTTTTGGCCTTGACCATACACTTACAACTGGTGTTATCAGTGGACTTAGGAGAGAAATTAGTTCTGCTGCTACTGGGCGTCCAATTCAAGACGTTATTCAGACTGATGCAGCCATAAACCCTGGTAATAGTGGAGGGCCACTCCTCGATAGTACAGGAAGCTTAATTGGAGTAAACACGGCTATATATTCTCCGTCGGGTGCATCTTCTGGTGTTGGATTTTCAATTCCAGTTGACACTGTCGGTGGCATAGTTGATCAGCTGGTTAAGTTTGGGAAAGTTACAAGACCTATTTTAGGAATCAAGTTTGCACCTGATCAATCTGTGGAACAACTCGGACTTAGTGGAGTGCTTATCTTAGATGCTCCTGCAAATGGTCCAGCTGGCAAAGCGGGTCTGCAATCAACCAAACGAGACACCTATGGCAGACTTATATTGGGTGATATCATAACATCTGTGAATGGGAAAAAGGTCACTAGTGGGAGTGACTTGTACAGAATTCTTGATCAATGTAAAGTGGGTGATCAGGTGATCGTGGAGGTTCTGCGTGGTGATCACAAAGAGAAAATCCCTGTATTGCTTGAACCAAAGCCCGATGAAACATAA 2391 0.4626 MASITHSNLSISLLLIVLITTISSPASAQLSVSFYANTCPSVFDTVRAATRSAINREARMGASLIRMFFHDCFVIGCDASILLDGADGEQTAPANAAGSVRGYEVIDSIKTQVDTACGRSVVSCADILAIVARDSVVEGCDGGILLDDIGSFVGEKTAPANNNSIRGYEVIDSIKTQVDRACGRSVVSCADILAVAARDSVVENSSSATTSMEHGYDASAQLSVSFYANTCPSVFDTVRSATRSAINREARMGASLIRMFFHDCFVNGCDGGILLDDTGSFVGEKTAPANNGSVRGYEVIDNIKTQVDTACGRSVVSCADIVAIAARDSVVERPKLNLLSAAVPAGMAAYSLISCANAPTTFSPSPTKKTNYATLSKSLFLFRKNPSFSTISPLLCVLHNNNTNNGNNCRNNLSINNKPSILPKFFLTSNLFSSARDSLFVLCTSLALSFSLFIGDVDSASAFVVTTPRKLQSDELATVRLFQENTPSVVYITNLAVKQDAFTLDVLEVPQGSGSGFVWDKDGHIVTNYHVIRGASDLRVTLADQSTYEAKVVGFDQDKDVAVLRVDAPKDKLRPIPVGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSTGSLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLVKFGKVTRPILGIKFAPDQSVEQLGLSGVLILDAPANGPAGKAGLQSTKRDTYGRLILGDIITSVNGKKVTSGSDLYRILDQCKVGDQVIVEVLRGDHKEKIPVLLEPKPDET* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00708 796 Gene3D - 137 219 - -
Eupl04g00708 796 ProSiteProfiles Plant heme peroxidase family profile. 29 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g00708 796 ProSitePatterns Peroxidases active site signature. 253 264 IPR019794 GO:0004601
Eupl04g00708 796 Gene3D - 30 136 - -
Eupl04g00708 796 PANTHER PEPTIDASE S12 422 791 - -
Eupl04g00708 796 SUPERFAMILY PDZ domain-like 650 780 IPR036034 GO:0005515
Eupl04g00708 796 Gene3D - 577 691 IPR043504 -
Eupl04g00708 796 Pfam Peroxidase 46 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g00708 796 Pfam Peroxidase 238 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g00708 796 SUPERFAMILY Trypsin-like serine proteases 479 689 IPR009003 -
Eupl04g00708 796 ProSiteProfiles PDZ domain profile. 683 755 IPR001478 GO:0005515
Eupl04g00708 796 SUPERFAMILY Heme-dependent peroxidases 134 203 IPR010255 GO:0004601|GO:0006979|GO:0020037
Eupl04g00708 796 Pfam PDZ domain 692 789 IPR001478 GO:0005515
Eupl04g00708 796 FunFam Periplasmic serine protease DegS 577 691 - -
Eupl04g00708 796 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Eupl04g00708 796 ProSiteProfiles Plant heme peroxidase family profile. 157 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g00708 796 SUPERFAMILY Heme-dependent peroxidases 26 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
Eupl04g00708 796 Gene3D - 692 796 IPR036034 GO:0005515
Eupl04g00708 796 PRINTS HtrA/DegQ protease family signature 624 641 IPR001940 GO:0004252|GO:0006508
Eupl04g00708 796 PRINTS HtrA/DegQ protease family signature 646 663 IPR001940 GO:0004252|GO:0006508
Eupl04g00708 796 PRINTS HtrA/DegQ protease family signature 738 750 IPR001940 GO:0004252|GO:0006508
Eupl04g00708 796 PRINTS HtrA/DegQ protease family signature 544 564 IPR001940 GO:0004252|GO:0006508
Eupl04g00708 796 PRINTS HtrA/DegQ protease family signature 586 610 IPR001940 GO:0004252|GO:0006508
Eupl04g00708 796 PRINTS HtrA/DegQ protease family signature 523 535 IPR001940 GO:0004252|GO:0006508
Eupl04g00708 796 FunFam Protease Do-like 1, chloroplastic 460 576 - -
Eupl04g00708 796 CDD PDZ_serine_protease 692 787 - -
Eupl04g00708 796 Gene3D - 460 576 IPR043504 -
Eupl04g00708 796 Gene3D - 222 374 - -
Eupl04g00708 796 SMART pdz_new 692 780 IPR001478 GO:0005515
Eupl04g00708 796 Pfam Trypsin-like peptidase domain 514 653 - -
Eupl04g00708 796 ProSiteProfiles Plant heme peroxidase family profile. 221 533 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl04g00708 796 SUPERFAMILY Heme-dependent peroxidases 221 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00708 Eupl-Chr4 10921467 10951057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00708 213 331 Peroxidase AT5G05340 62.185 1.18e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00708 K25895 - nnu:104587209 719.153