Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00703 ATGTCTCTTCATTGCAGAGCTTCCAATGGATCGCCATTCCTCTGCAACTTCTCTCCTGCCTCCTCAGATAGGCTTGCTCAACCTATTGTTTCTTCTTCCTTTTGGGGCAGAGATTTGTGTTCCCGTAATGGAGGTTCTAGTGTTAAAGAGAAGCTTCTTTTCAGTCGCAGAATTACTACTAGGGTTTTTGCAATGTCGAATTCTCCTCCTTTTAAGATGAATCTTAATGAGTATATGGTGACGCTTGAGAAACCACTAGGGATTAGATTTGCTGTTTCTGTCGATGGAAAGATCTTCGTTCACGCTCTTAAAAAAGGGGGCAACGCTGAGAGATCGAGAATAATCATGGTAGGCGACTCTTTGAAAAAGGCAAGTAATGGGCCGAGTGGTGGGCTTATTGAGATCAAGAACTTCGGGGATACACAGAAAATGCTCGAGGAGAAAAAAGGATCTTTTAGCCTGGTCCTTGAAAGACCCTTCTCTCCTTTTCCAATTCAACAATTGCATTTTATGAATGATCTTGATATTTTATTCAATAGAGGTCGGGTTCCAATGGCCACCTGGAACAGATCTATATTGGTATCACATTTGCAGCCATCATCTGAGGGCAGTGGAAATTCAGGGTTTGCCATATTTTCCCCAAAATTATTGACATCACAAGGGTGGAAGTATCTAAGTGATCAAAATGGATCAATTTATTCTCTATCACAGAATAATATTGTTGCTGCACCTATCAGCCAGCTTGTTTGTATTTTCTCTGAGGAAGAATCTGGAGATGTTGAATGGGCTCATGGGAGTTTCCCTTTGGAGGAATATATTAAAGCTCTTGATCGTTCTAAAGGCGAGCTATATTATAATCACTCTCTTGGTATGCAGTACAGCAAGATTACAGAGCAAATATATGTGGGATCATGTATACAAACAGAACATGATGTGGAAACTTTGGCTAATGTTGTGGGCGTCACTGCTGTACTGAATTTCCAGAGCCCAAATGAGTGTGCAAATTGGGCAATCAACTCCGAATCAATCATTGATTCATGCCGTCGACATAATATCCTTATGATCAACTATCCTATAAGGGAGGTAGATTCATTTGATTTGAGGAAGAAACTTCCGTTTTGTGCAGGGCTCCTATTACGGTTGTTGAGAAAGAACCTTCGAGTTTTTGTGACTTGTACTACTGGGTTTGATAGATCCCCAGCTTCTGTGATTGCATACTTGCACTGGATGCAAGATACTTCCCTTCATGATGCATATAATTTTGTTACAGGGTTGCACCCATGCAGGCCTAACAGATCAGCAATTGTCTGGGCAACATGGGATCTTATTGCTATGGTGGAAAACGGAAGACATGACGGACCTCCAACTTATGCTTTGACTTTTGTGTGGAACGGGCAAGAGGGGGAGGATGTATGCTTGGTTGGAGATTTCACAGGAAATTGGAAAGAACCCATTAGGGCAGTTCACAAGGGTGGACCAAAATATGAAGCTGAAGTTAAACTTCCACAGGGGAAGTACTCCTATAAGTTCATCATCAACGGGCAATGGAGGCACTCAACAGCGTCTCCAACAGAAACCGATCAACGGGGAAATGTCAACAATGTTATTATAGTGGGAGATACTGCCAGCATAAGGCCTACTGTTCACCAACAAACAAAGGATTCCACTGTTGTGAAGGTGATTGAGAGGCCATTGACGGAATCCGAGCGTGTCATGTTAGCAAAAGCAGCTCGATGTGTTACATTCTCCATATGTCCAATCAGACTACATCCCAAGTAG 1779 0.4233 MSLHCRASNGSPFLCNFSPASSDRLAQPIVSSSFWGRDLCSRNGGSSVKEKLLFSRRITTRVFAMSNSPPFKMNLNEYMVTLEKPLGIRFAVSVDGKIFVHALKKGGNAERSRIIMVGDSLKKASNGPSGGLIEIKNFGDTQKMLEEKKGSFSLVLERPFSPFPIQQLHFMNDLDILFNRGRVPMATWNRSILVSHLQPSSEGSGNSGFAIFSPKLLTSQGWKYLSDQNGSIYSLSQNNIVAAPISQLVCIFSEEESGDVEWAHGSFPLEEYIKALDRSKGELYYNHSLGMQYSKITEQIYVGSCIQTEHDVETLANVVGVTAVLNFQSPNECANWAINSESIIDSCRRHNILMINYPIREVDSFDLRKKLPFCAGLLLRLLRKNLRVFVTCTTGFDRSPASVIAYLHWMQDTSLHDAYNFVTGLHPCRPNRSAIVWATWDLIAMVENGRHDGPPTYALTFVWNGQEGEDVCLVGDFTGNWKEPIRAVHKGGPKYEAEVKLPQGKYSYKFIINGQWRHSTASPTETDQRGNVNNVIIVGDTASIRPTVHQQTKDSTVVKVIERPLTESERVMLAKAARCVTFSICPIRLHPK* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00703 592 SUPERFAMILY PDZ domain-like 83 159 IPR036034 GO:0005515
Eupl04g00703 592 CDD E_set_AMPKbeta_like_N 460 538 - -
Eupl04g00703 592 Gene3D Protein tyrosine phosphatase superfamily 285 554 IPR029021 -
Eupl04g00703 592 Pfam Glycogen recognition site of AMP-activated protein kinase 459 540 IPR032640 -
Eupl04g00703 592 Gene3D Immunoglobulins 446 542 IPR013783 -
Eupl04g00703 592 ProSiteProfiles PDZ domain profile. 79 160 IPR001478 GO:0005515
Eupl04g00703 592 Pfam Dual specificity phosphatase, catalytic domain 313 431 IPR000340 GO:0008138|GO:0016311
Eupl04g00703 592 SUPERFAMILY E set domains 456 539 IPR014756 -
Eupl04g00703 592 CDD DSP_laforin-like 291 437 IPR045204 GO:0019203
Eupl04g00703 592 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 19 589 - -
Eupl04g00703 592 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 284 435 IPR029021 -
Eupl04g00703 592 SMART dsp_5 292 440 IPR020422 GO:0006470|GO:0008138
Eupl04g00703 592 ProSiteProfiles Dual specificity protein phosphatase domain profile. 292 448 IPR020422 GO:0006470|GO:0008138
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00703 144 592 Protein tyrosine phosphatase (PTP) family AT3G01510 69.265 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00703 - - nnu:104587213 919.457