Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00700 ATGACGGGCAGACGGAGAAGAGGGATACACTTCAGTAAGCTCTACTCGTTTTCATGCATCCGTTCTTCATTTGAGCGGGATCATTCTCAGATAGGAGGGAGAGGTTACTCGAGAGTGGTTTATTGTAATGATCCTGATAACCCTGAAGCGGTTCAGCGTAATTACAGGGGAAACTATGTGTCCACCACTAAGTATACGGCAGCTAATTTTATTCCCAAGTCTTTATTTGAGCAATTTAGGAGGGTTGCAAATATATACTTTCTTGTGGTGGCTTGTGTTTCATTTAGTCCCTTGGCACCTTATTCGGCTCTTAGTATTCTTGCTCCTTTGGTGGTTGTGATTGGTGCTACTATGGTCAAAGAGGCCGTGGAAGACTGGAGACGTAAAATGCAGGATATAGAGGCCAACAACCGAAAGGCCAAAGTGTATGGGAGGGATCATACTTTCCATGAAACCAAATGGAAGAAACTACGAGTTGGAGATCTTGTTAAAGTGGAGAAGGATAATTTCTTTCCTGCTGATCTGCTTCTTCTTTCATCAAGTTATGAGGATGGAATTTGTTATGTTGAGACAATGAACCTTGATGGTGAGACAAACTTAAAAATTAAGCAAGCTTTGGAGGCGACATCTGCATTGCGTGATGAATCCTCCTTCCAGAAATTTAAGGCAGTGATCAAATGTGAAGATCCAAATGAAAATCTGTATTCCTTTGTTGGTAGTTTGTACTATGATGGTACAGAGTATCCTCTTTCTCCACAGCAACTTCTCCTGAGAGATTCAAAGCTTCGAAACACAGAATATATCTATGGTGTGGTAGTTTTTACTGGGCATGACGCAAAGGTGATGCAGAACGCTACAGATCCTCCTTCGAAGAGGAGTAAGATTGAGAGGAGAATGGATAAGATAGTCTATATCCTTTTCAGTACCCTGGTTTTGATTTCTTCTGTTGGATCTGTTTTCTTTGGAATCGAAACTAAGGAGGATATTAGTGGTGGAAAGTACAAAAGGTGGTATCTCAGACCAGATGCTTCGACTGTATTTTTTGACCCAAGAAGAGCATCTTTAGCAGCATTTTATCATTTCTTGACGGGCCTTATGTTGTATGGGTATTTGATACCAATATCCTTGTATGTATCCATAGAAATTGTGAAGGTTTTACAGAGTATATTTATTAACCAAGATCAGGAGATGTACTATGAGGAAACAGACAGGCCAGCACAAGCCCGCACATCAAATTTGAATGAGGAGCTTGGTCAGGTTGATACTATACTATCTGATAAAACAGGTACACTGACATGCAACTCAATGGAGTTTGTTAAATGCTCCATAGCAGGTACTGCTTATGGCCGTGGTGTGACAGAAGTGGAGAGGGCTATGGCAAGAAGAAAAAAGGATGGCCCATCTGAATTTGTTGATCCATCATCTGATTTGGGGGAGCATGACAGTGACGTCGTGGACTCAAAAACGCCAATCAAAGGCTTCAACTTCAGAGATGAACGCATAATGAATGGGCAGTGGATGAAGGAACCTCATTCAGATATCATTCAGAAGTTCTTCCGTGTATTAGCAATCTGCCATACAGCCATTCCTGATGTAAATAATGAGTTAGGTGAAATTTCTTATGAAGCTGAGTCCCCAGATGAAGCAGCTTTTGTCATAGCCGCAAGGGAAGTTGGATTTGAGTTCTACGAAAGGACACAGACAAGCATCAAATTGCATGAGTTAGATCCTGGGACTGGAAAGAAGGTTGACAGATTATATAAGCTTCTGCATGTCTTAGAGTTTAGTAGTTCTCGTAAGCGAATGTCTGTGATTGTGAGGAATGAAGAGGGTCAGTTGTTGCTCCTTTGCAAGGGTGCGGACAGTATAATGTTTGAAAGGCTTTCGAAGGATGGGCAGTTGTTTGAGGCTGAGGCCAAGGAGCACATCGACAAATTCGCCGAGGCAGGTTTACGAACCTTGGTAGTTGCATACCGTGAGCTTGGTGAAGAAGAGTACAAAAGATGGCAAGAGGAATTTTCAAAGGCCAAAACTTCCGTCAGTGCAGATCGGGATGCTCTGGTGGATGCTGCAGCTGATAAGATTGAGAGGGATTTGATTCTTCTTGGTGCCACAGCTGTTGAGGACAAACTACAGAAGGGGGTTCCTGAGTGTATCGACAAGCTTGCCCTGGCTGGAATTAAGATTTGGGTCTTAACTGGTGATAAGTTGGAAACTGCAGTCAATATCGGGTATGCATGTAGCTTGCTGAAACAAGGGATGAAGCAGGTTGTGATCGCACTAGATACACCGGATATCATTGCCTTGGAGAAACAAGGGGACAAGGAGGCCATTGCAAAGGCATCTCATGAGAGCATAACAAGGCAAATACAAGAAGGAAAGTGCCGAGTTAGTTCAGCTAAACAAAGTTCTGTTAAATCTGCTTTGATAGTTGATGGTAAGTCTTTGACTTTTGCTCTGACGGAGAATCTGGAGAACTCGTTTCTGGAGCTTGCAATTGATTGTGCATCTGTTATTTGCTGTCGTTCTTCACCAAAACAGAAGGCACTTGTTACAAGATTAGTGAAAATGGGAACGGGTAAAACGACACTAGCAATTGGAGATGGGGCAAATGATGTCGGCATGCTTCAAGAAGCTGACGTTGGAGTTGGCATTAGTGGTGTTGAGGGGATGCAGGCTGTCATGGCTAGTGATTTTGCAATAGCTCAATTCCGTTTTTTGGAGCGTTTGTTGCTTGTGCATGGCCATTGGTGTTACAGGAGAATATCTATGATGATATGCTACTTTTTCTACAAGAACATAACATTTGGGTTTACCCTATTTTGGTTTGAGGCTCATGCTTCTTTCTCCGGGCAGCCTGCTTATAATGATTGGTACATGTCCCTCTACAATGTCTTCTTCACTTCGCTTCCTGTGATTGCTCTTGGTGTTTTCGATCAGGATGTTTCTGCACGACTTTGCCTCAAGTACCCTCAATTGCATCAAGAAGGTGTTAAGAACATTCTCTTCAGCTGGTGCCGTATACTTGGCTGGATGCTTAATGGGGTTTGCAGTTCCGTTATCATCTTTGTCTTCACTACTAGTTCCATCCTTCACCAGGCCTTCCGGAGAGACGGACGTGTGGCAGGGTTCGAGGTCCTTGGGGCTGCAATGTACACATGCGTTGTGTGGACTGTGAACTGCCAGATGGCTCTGTCTATCAACTACTTCACTTGGATCCAGCACTTCTTCATCTGGGGCAGCATCACTTCCTGGTATATCTTCTTGGTGATTTACGGGTTGCTCCCACCCACAATATCTACAACGGCTTACAAGGTTCTTGTGGAAGCCTGCGCCCCGAGCCCACTGTATTGGCTGGCCACCCTCTTTGTTGTCATTTCTGCTCTACTACCCTACTTTTCCTACAAGGCTTTTCAGATGAGGTTTTTCCCAATGTACCACAACATAGTTCAGAGAACAAGACTGCAAATCTCAGAGACTCCAACTCCCATTGGGTTCTCTACTCGGGTCGAGGGAAGAATCTGGCATCTGAAGGAGAGACTGTGGCACAGAGAGCCATGA 3561 0.4378 MTGRRRRGIHFSKLYSFSCIRSSFERDHSQIGGRGYSRVVYCNDPDNPEAVQRNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYSALSILAPLVVVIGATMVKEAVEDWRRKMQDIEANNRKAKVYGRDHTFHETKWKKLRVGDLVKVEKDNFFPADLLLLSSSYEDGICYVETMNLDGETNLKIKQALEATSALRDESSFQKFKAVIKCEDPNENLYSFVGSLYYDGTEYPLSPQQLLLRDSKLRNTEYIYGVVVFTGHDAKVMQNATDPPSKRSKIERRMDKIVYILFSTLVLISSVGSVFFGIETKEDISGGKYKRWYLRPDASTVFFDPRRASLAAFYHFLTGLMLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEETDRPAQARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGVTEVERAMARRKKDGPSEFVDPSSDLGEHDSDVVDSKTPIKGFNFRDERIMNGQWMKEPHSDIIQKFFRVLAICHTAIPDVNNELGEISYEAESPDEAAFVIAAREVGFEFYERTQTSIKLHELDPGTGKKVDRLYKLLHVLEFSSSRKRMSVIVRNEEGQLLLLCKGADSIMFERLSKDGQLFEAEAKEHIDKFAEAGLRTLVVAYRELGEEEYKRWQEEFSKAKTSVSADRDALVDAAADKIERDLILLGATAVEDKLQKGVPECIDKLALAGIKIWVLTGDKLETAVNIGYACSLLKQGMKQVVIALDTPDIIALEKQGDKEAIAKASHESITRQIQEGKCRVSSAKQSSVKSALIVDGKSLTFALTENLENSFLELAIDCASVICCRSSPKQKALVTRLVKMGTGKTTLAIGDGANDVGMLQEADVGVGISGVEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNITFGFTLFWFEAHASFSGQPAYNDWYMSLYNVFFTSLPVIALGVFDQDVSARLCLKYPQLHQEGVKNILFSWCRILGWMLNGVCSSVIIFVFTTSSILHQAFRRDGRVAGFEVLGAAMYTCVVWTVNCQMALSINYFTWIQHFFIWGSITSWYIFLVIYGLLPPTISTTAYKVLVEACAPSPLYWLATLFVVISALLPYFSYKAFQMRFFPMYHNIVQRTRLQISETPTPIGFSTRVEGRIWHLKERLWHREP* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00700 1186 FunFam Phospholipid-transporting ATPase 116 286 - -
Eupl04g00700 1186 FunFam Phospholipid-transporting ATPase 702 906 - -
Eupl04g00700 1186 Gene3D - 545 701 IPR023299 GO:0000166
Eupl04g00700 1186 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Eupl04g00700 1186 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 1144 IPR023298 -
Eupl04g00700 1186 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Eupl04g00700 1186 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Eupl04g00700 1186 Coils Coil 116 136 - -
Eupl04g00700 1186 CDD P-type_ATPase_APLT_Dnf-like 57 1026 - -
Eupl04g00700 1186 Gene3D - 115 286 - -
Eupl04g00700 1186 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Eupl04g00700 1186 Pfam Cation transport ATPase (P-type) 542 629 - -
Eupl04g00700 1186 NCBIfam HAD-IC family P-type ATPase 837 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl04g00700 1186 FunFam Phospholipid-transporting ATPase 544 702 - -
Eupl04g00700 1186 Pfam Phospholipid-translocating ATPase N-terminal 40 104 IPR032631 -
Eupl04g00700 1186 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 704 IPR023299 GO:0000166
Eupl04g00700 1186 SFLD p-type atpase 407 917 IPR044492 -
Eupl04g00700 1186 SUPERFAMILY HAD-like 419 921 IPR036412 -
Eupl04g00700 1186 NCBIfam phospholipid-translocating P-type ATPase 55 1152 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Eupl04g00700 1186 MobiDBLite consensus disorder prediction 462 483 - -
Eupl04g00700 1186 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Eupl04g00700 1186 Gene3D - 702 906 IPR023214 -
Eupl04g00700 1186 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1154 - -
Eupl04g00700 1186 Pfam E1-E2 ATPase 136 326 - -
Eupl04g00700 1186 SFLD Haloacid Dehalogenase 407 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00700 Eupl-Chr4 10786101 10801499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00700 9 1173 Primary Pumps ATPases AT1G68710 65.920 0.0 1689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00700 K01530 - nnu:104587217 1995.32