LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl04g00695	ATGTCGGACTCGGCTATAGAGTCGCCGGATTCCTCAGATGGATATCCTCCTACTCCCGTTGATCAAGACTCGCCTCCGGCAAATACTGAATCTCCACCTTCAGATTCTCCTCCAATTCCAGTCGAAGGGGAAGGGCCCCCACCGCCCTCTGAAGGGCAGGATTCTTCTTCATCTCCCTCTCCTTCGGATTCAAACAATTCACAACCTTCACCGCTGTGGGATTCTGGTTCTTCATCACCTTTGCCACCATTGGGTTCGGACTCTTCACCACCGTCAGATTCCAAATCTTCCCCACCTACACCTTCATCCTATTCACACTCTTCACAGCCTCCACCACCATCAGGTTCAGACAATTCACAGCCTTCACCACCATCAATGTCAAACTCTTCAGCACCTCCACCACCGTCAGGTTCAACCACTTTGCAGCCTTTTCTACCGATAAAATCACACTCTTCACCTCCTTCGCCAGTAGAAGGTTCTTTGTTTTCGTCACCACCAAATTCCTCTGTTGCTCATCCTCCTCGCGCTGTCATTGATCAGTCACCCTCTCCACCATCTGGCATCCCCCCTCCATCAAAAATTTCTTCTCCTTCACCTCCTAATTCTCCTCCTGAATCCTTGCCAACTCCGGCAGTCTCTAATTATCCTCCTCCACTGGCTGCCAGTAGCTCAGGATCATCACCACCGGTACAAACAATCACCCCTCCATTGCCTGAAACTCCACCCAGTGTCACCACGTCTCCTCAGTTGCCTGGCTCACCACCAGCCACTGCAACACTTAATCCTACTCCTTCAACTGAGGTCACACCTTCAGCACCATCTATCCCAACTCCTCCAGCCTCTCGAACATCAAATCTTGTCCCAACACTTACCCCACCTTCCACACACTCGGATCCCAATTCTTCCACACCGGTGCGATCCAGCCCTTCGTCAATGTCAAGTGGCAGTTCTGGAAGCGGGATTGAATTCGGTGCAACAGTAGCGGGTGTGATAATCATTGCCTTGGTCACCTTCTTCTTCGTCATCTTGAGAAGGAAGAAGAGACAGGCACAGGCTTCAACTGCCCGTTATAGATCTAAACCCGATAGCCTTTCTGTGAAATCAGACGAGCATTACTATAGAAAGCAACACGTTATTGCGGGTTCTGGTCAATCAGATGGATACTTCAATGGAAAACCCCTACCTTCTCCTTCTGCAACTGGAAATAGCAATGTAAGCTACAGAGGAAATTTTCCCAATTCTGGAGGGCCAGAGTCAGATGTAATAGGGGGTTCTAAGTCATGGTTCAGATATGAAGAGTTGATGGAAATAACCAATGGGTTTTCTCGTCAAAATGTTCTTGGAGAGGGTGGGTTTGGATGCGTGTACAAGGGTTGGCTGCCAGATGGGAGAGTAGTGGCAGTGAAACAGCTCAAGGCCGGTAGTGGACAGGGGGAACGAGAATTTAGAGCTGAAATCGAGATCATTAGCCGTGTTCACCATCGGCATTTGGTCTCTCTGGTGGGCTATTGCATTGCTGAACATCATAAATTGCTTGTCTACGAGTTTGTTCCAAATAATAATCTTGCACACCACTTGCACGGGAAAGGAATGCCTGTGTTGGAATGGTCAAAAAGAGTTAAGATTGCTGTAGGTGCTGCTCGTGGGTTGGCATATTTACATCAAGACTGTCAGCCAAAGATTATCCACAGGGACATCAAGTCAGCAAACATCCTGTTGGATGACACTTTTGAAGCAAAGGTTGCAGACTTTGGGCTTGCCAAACTATCAAATGACACTCACACCCATGTATCAACTCGTGTTATGGGGACATTTGGGTATGTGGCACCAGAGTACGCATCAAGTGGCAAATTGACTGATAGATCTGATGTTTTTTCATTTGGAGTCGTGCTTCTAGAGCTTGTGACGGGACGTAAACCTCTTGATCCGGCTCAGCCTTTGGGGAATGAGAGTTTAGTTGAATGGTCTCTGCAGGGCATGTTATATTTTACTTTTGCAACACGGGTGTCTGTGGAGTATTTGAGAAGGATCATACGGGTTGAAGTACCTCAAAAGAATCAAGATTCTTCCTAA	2073	0.4785	MSDSAIESPDSSDGYPPTPVDQDSPPANTESPPSDSPPIPVEGEGPPPPSEGQDSSSSPSPSDSNNSQPSPLWDSGSSSPLPPLGSDSSPPSDSKSSPPTPSSYSHSSQPPPPSGSDNSQPSPPSMSNSSAPPPPSGSTTLQPFLPIKSHSSPPSPVEGSLFSSPPNSSVAHPPRAVIDQSPSPPSGIPPPSKISSPSPPNSPPESLPTPAVSNYPPPLAASSSGSSPPVQTITPPLPETPPSVTTSPQLPGSPPATATLNPTPSTEVTPSAPSIPTPPASRTSNLVPTLTPPSTHSDPNSSTPVRSSPSSMSSGSSGSGIEFGATVAGVIIIALVTFFFVILRRKKRQAQASTARYRSKPDSLSVKSDEHYYRKQHVIAGSGQSDGYFNGKPLPSPSATGNSNVSYRGNFPNSGGPESDVIGGSKSWFRYEELMEITNGFSRQNVLGEGGFGCVYKGWLPDGRVVAVKQLKAGSGQGEREFRAEIEIISRVHHRHLVSLVGYCIAEHHKLLVYEFVPNNNLAHHLHGKGMPVLEWSKRVKIAVGAARGLAYLHQDCQPKIIHRDIKSANILLDDTFEAKVADFGLAKLSNDTHTHVSTRVMGTFGYVAPEYASSGKLTDRSDVFSFGVVLLELVTGRKPLDPAQPLGNESLVEWSLQGMLYFTFATRVSVEYLRRIIRVEVPQKNQDSS*	691

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Eupl04g00695	690	MobiDBLite	consensus disorder prediction	126	140	-	-
Eupl04g00695	690	MobiDBLite	consensus disorder prediction	383	404	-	-
Eupl04g00695	690	ProSiteProfiles	Protein kinase domain profile.	441	690	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Eupl04g00695	690	MobiDBLite	consensus disorder prediction	216	230	-	-
Eupl04g00695	690	CDD	STKc_IRAK	447	655	-	-
Eupl04g00695	690	SMART	serkin_6	441	680	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Eupl04g00695	690	MobiDBLite	consensus disorder prediction	30	47	-	-
Eupl04g00695	690	Gene3D	Phosphorylase Kinase; domain 1	411	516	-	-
Eupl04g00695	690	MobiDBLite	consensus disorder prediction	231	249	-	-
Eupl04g00695	690	MobiDBLite	consensus disorder prediction	55	103	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl04g00695	Eupl-Chr4	10676082	10685294	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl04g00695	290	656	Trihelix Transcription Factor Family	AT1G70460	60.263	1.13e-150	452

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Eupl04g00695		Pkinase	1.9e-45	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl04g00695	-		-	ming:122076067	580.482

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